| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_02270 |
|---|
| Symbol | |
|---|
| ID | 8398775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 260220 |
|---|
| End bp | 261329 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644996319 |
|---|
| Product | amino acid ABC transporter membrane protein |
|---|
| Protein accession | YP_003153695 |
|---|
| Protein GI | 257067440 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCT CCGTCGTCTC CCCCGAGACC GACCGCCGCC CCCCGGAGGC CGCTGCGGCC
CTCGACCGCG CCCCGGCGAC GGGACGGCAG GAGATGTCGT GCCCCCGCCC GGACGCATCG
GCCGACGGGC CGACCGCTGA CGCCTCCGCC GCCGACGGGT CGGCGCCCGC CGCGCACGCC
CCTGAGCCGC CCGCCGAGGA CCTCTCCCAC CTGCGCGTGG TCCCGGCCAA GCACCCGGGC
CGGCTGGTGC TCGCGCTCCT CGTCGGCCTC GCGGTGCTCG TGGTGCTGTA TTCCTTCGTC
ACCAACCCGC GCTGGGAGTG GGGCGTGGTG GCGCAGTGGT TCTTCGCGGA ATCGATCATC
CGCGGCCTGC TGGAGACGCT GCGGCTCACC GCCGCGGCCG GTGCGATCGG CTTCGGCCTG
GGCCTCGTGC TCGCCCTCAT GCGGCTGTCG AAGTCCTCGC TGATCTCCGG CGTGAGCTGG
ACCTTCTCCT GGGTCTTCCG TTCCACGCCG CTGCTGGTGC AGCTGCTGCT CTGGTACAAC
CTCGGCTACC TGTACGAGCA GGTGAGCCTC GGGATCCCGT TCACCGGCGC GACCTTCTTC
GAGGCCCGCA CGAGCGATCT GATGACCCCG ATGCTCGCGG CGATCCTCGG GCTCGGGCTG
CACCAGGCCG CCTACGCCGC CGAGCTGATC CGCGGCGGCA TCCTCTCCGT GGACCAGGGG
CAGCTGGAGG CCGCCAGCGC GCTGGGCATC CCCGCCCGCG ACCGCTCGCT GCGGATCGTG
CTGCCGCAGG CGATGCGGGC GATCCTGCCT CCCGCGTTCA ACGAGATCAT CGGCCTGGTC
AAGGGCACCT CGATCGTGTA CGTCCTCGCC CATGCCGAGC TGTTCTTCAC CGTCCAGCTG
ATCTACGGCC GCACCCAGCA GGTGCTGCCG ATGCTGCTGG TCGCGACGCT CTGGTACGTG
GTGATCACCT CGGCGCTGTC CGTCGGCCAG TACTACATCG AGCGCCACTT CTCCAAGGGA
GCCCTGCGCA CCCTGCCTCC CACCCCGCTG CAGTCGCTGC GCGCCCGCCT GGGCCGCCGG
CGCCCCACCC CGACGGGAGC CCCCGCATGA
|
|---|
| Protein sequence | MTSSVVSPET DRRPPEAAAA LDRAPATGRQ EMSCPRPDAS ADGPTADASA ADGSAPAAHA
PEPPAEDLSH LRVVPAKHPG RLVLALLVGL AVLVVLYSFV TNPRWEWGVV AQWFFAESII
RGLLETLRLT AAAGAIGFGL GLVLALMRLS KSSLISGVSW TFSWVFRSTP LLVQLLLWYN
LGYLYEQVSL GIPFTGATFF EARTSDLMTP MLAAILGLGL HQAAYAAELI RGGILSVDQG
QLEAASALGI PARDRSLRIV LPQAMRAILP PAFNEIIGLV KGTSIVYVLA HAELFFTVQL
IYGRTQQVLP MLLVATLWYV VITSALSVGQ YYIERHFSKG ALRTLPPTPL QSLRARLGRR
RPTPTGAPA
|
|---|
| |