Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_00580 |
Symbol | |
ID | 8398608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 58922 |
End bp | 59893 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644996156 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_003153532 |
Protein GI | 257067277 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000379628 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCT CCACCGTGAC CATCGTCGGC GCCGGCTACA TGGGCGGCGG CATCGCCCAG GTCCTCGCCA TCGCCGGCTT CGACGTGACC ATCGCCGACG TCAGCGTCGA GAACGCGAAC GCCTCCCTCG AGCGTCTCCG CAAGGAGGCG CAGGACTTCG AGGACCAGGG CCTGTACAGC CCCGGCGCCG CCGAGCTCGT CGCGAAGAAC ATCTCCGCCG GCAAGTCCAT CGAGGACGCC GTCGCCGATG TCGACTTCAT CGAGGAGGCC GTCTTCGAGC GCCTCGACGT CAAGCGCGAC GTGCTCGCGA CCATCTCCGA GCACGCCCGC CCGGACGCCA TCATCGGCAC CAACACCTCG ACCATCCCGG TCAAGGAGCT GGTCAGCGCG GTGAAGCACC CCGAGCGCTT CCTCACCGTG CACTTCTCCA ACCCCGCCCC GTTCATCCCC GGCGTCGAGC TCGTGGCCGG CGAGGCGACC ACCCCCGAGA CCGTCACCGC GGTCAAGGAG CTGCTGGAGA AGTCCGGCAA CCAGGGCGCC CAGGTCGCCG ACACCCCCGG CATGGTGCTC AACCGCCTCC AGTACGCGCT GCTGAAGGAG GCCACCTCGA TCGTCGAGGA GGGCGTCGCC ACCGCCGAGG ACGTCGACAC CATCGTCCGC ACCACCTTCG GCTTCCGCCT GGGCTTCTTC GGGCCCTTCG CGATCGCCGA CCAGGCGGGC CTGGACGTCT ACGCGAACTG CTTCGTGACC TTCGAGGACG CCTTCGGCGA CCGCCTGGCC ACCCCGCAGA TCCTCACCGA CTCCGTCGCC GAGGACCGCA AGGGCGTCAA GAACGGCAAG GGGCTGCTGG GCGACTACGA CGAGGCCACC GCGGCGGAGC TCATCGCCTA CCGCAACAAG GCCTACGCCA AGATGTCCCA GCTCCTGGCC GAGCTCGGCC CGGCCCCGAA GCCCACGCCG AAGAACTCCT GA
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Protein sequence | MTISTVTIVG AGYMGGGIAQ VLAIAGFDVT IADVSVENAN ASLERLRKEA QDFEDQGLYS PGAAELVAKN ISAGKSIEDA VADVDFIEEA VFERLDVKRD VLATISEHAR PDAIIGTNTS TIPVKELVSA VKHPERFLTV HFSNPAPFIP GVELVAGEAT TPETVTAVKE LLEKSGNQGA QVADTPGMVL NRLQYALLKE ATSIVEEGVA TAEDVDTIVR TTFGFRLGFF GPFAIADQAG LDVYANCFVT FEDAFGDRLA TPQILTDSVA EDRKGVKNGK GLLGDYDEAT AAELIAYRNK AYAKMSQLLA ELGPAPKPTP KNS
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