Gene Bfae_00030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_00030 
Symbol 
ID8398554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3502 
End bp4746 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content72% 
IMG OID644996103 
ProductDNA replication and repair protein RecF 
Protein accessionYP_003153481 
Protein GI257067226 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0950556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCTGA CCTCGCTCGA CCTCACCGAC TTCCGCTCCT ACTCCCGGCT CACCCTGCCG 
GTCCGGCCCG GCATCACCGT GCTCGTCGGC CAGAACGGTC AGGGCAAGAC GAACGTCGTC
GAAGCCGTCT GGTACCTCGC GACGCTGTCC AGCCATCGGG TCCCCCACGA CGCCGCGCTC
GTGCACCGCG GGGAGAGCAC CGCGATCGTC CGCGCGAGCT TCGTGCGCGC CGGCCGGCCG
CTGCAGGTGG ATCTCGAGAT CACCCCGGGC AAGTCCAACC GGGCGCGGCT GCAGGGACAG
AACGTGCCCC GGCTGCGTGA CCTGCTCGGC GAGGTGCGCG CCGTGCTCTT CGCCCCCGAG
GATCTGGGCC TGATCAAGGC CGATCCCGAG GGCCGCCGGC GCTTCCTCGA CGAGCTGCTG
TTCGAGATCG CCCCCCGCTT CGCCTCGGTG AAGGCGGATT ACGACCGGGT GCTCAAGCAG
CGCGGCAACC TGCTCAAGCA GATGCGGTCG ATGCGGCGCG GCAGCAGCGG CCGCAGCGTG
GGCGGGCTGG ACCCGGCCGA GACCGCCTCC TCGACCCTCG AGGTCTGGGA CCAGCAGCTG
GCCCGCTACG GCGCCGAGCT GCTGCGCGCC CGCCTCCACC TCGTCAACCG CCTCAGCCCG
CATCTGGGCT ACTCCTACCT GCGGGTCTCG ACCGACGAAG GTGCGGAGCA GGCCCTCGAC
CTTCCGCCCG ACCAGCGCGG GGACGTGGAC TCCCCGGCGG AGATCCGGTA CCGCTCCGCC
GTGCTGGACC AGCTCGGCGC CCCGGCCGGC TCCCTGCCCG CCACCCGCGA GATCCACGAC
GGCATGCTCG AGATGCTGGC CGCGGGTCAT GACGAGGAGA TCGATCGCGG TGCCACGCTG
ACCGGCCCGC ACCGCGACGA CATGGAGATC CGCCTGCACG ACTTCCCGGC CAAGGGGTAC
GCGAGCCACG GCGAGTCCTG GTCGCTCGCG CTCGCGCTGC GGCTGGCCTC CTACGACCTG
CTGCGCCTCG AGGAGGGCGA TCTGGGCGAC GGCGAGCCGA TCCTGATCCT CGATGACGTG
TTCAGCGAGC TGGACACCCG CCGCCGCGAA CGGCTGGGCA GGATCGTCAC CACCGCCTCG
CAGGTGCTGA TCACCACCGC GAACGACGGC GACATCCCCG ACTCGCTCGA GGGCGAGATC
CACGTGGTCG ACGTGACCCT CGGCGCCGCG GTGCCCCGGT CATGA
 
Protein sequence
MQLTSLDLTD FRSYSRLTLP VRPGITVLVG QNGQGKTNVV EAVWYLATLS SHRVPHDAAL 
VHRGESTAIV RASFVRAGRP LQVDLEITPG KSNRARLQGQ NVPRLRDLLG EVRAVLFAPE
DLGLIKADPE GRRRFLDELL FEIAPRFASV KADYDRVLKQ RGNLLKQMRS MRRGSSGRSV
GGLDPAETAS STLEVWDQQL ARYGAELLRA RLHLVNRLSP HLGYSYLRVS TDEGAEQALD
LPPDQRGDVD SPAEIRYRSA VLDQLGAPAG SLPATREIHD GMLEMLAAGH DEEIDRGATL
TGPHRDDMEI RLHDFPAKGY ASHGESWSLA LALRLASYDL LRLEEGDLGD GEPILILDDV
FSELDTRRRE RLGRIVTTAS QVLITTANDG DIPDSLEGEI HVVDVTLGAA VPRS