Gene Apre_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1574 
Symbol 
ID8398386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1695488 
End bp1696117 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content40% 
IMG OID644995938 
Productribosomal protein L3 
Protein accessionYP_003153316 
Protein GI257067060 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000299368 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGTA TATTTACAAC AAAAGTAGGC ATGACTCAAG TCATCGACGA AGATGGAGTT 
ATTACTCCTG TTACTGTCCT AAAAGCTGAC GAAAACGTAG TTGTACAAGT TAAAACAGTA 
GAAACTGACG GTTACAACGC AATCCAAGTT GGTTACATGG ACAAGAAAGA AAAGAATGTA 
ACAAAACCAG TAAGAGAACA CTTCAAAAAG GCTAACGCTA GCACAAAGAG ATTCCTAAGA 
GAGATCAACT TTGGAGAGGA AACTCCAGAA TTAAATCTTG GAGATACAAT CACAGTTGAA 
CAATTTGAAG CTGGAGACAT AGTTGACGTT GTTGCTACAA GCAAGGGTAA GGGAACTCAA 
GGCGCTATCA AAAGATGGAA CTACGGAAGA GGTCCAGCAA GCCACGGTTC AAAATCACAC 
AGAGTTGCAG GTGCAAGAGC TGCAGGTTCT GACCCAGCAA GAGTTTTCAA AGGTAGAAAA 
GGTTCAGGAA AAATGGGTAA CGAAAGAGTT ACTGTCCAAA ACATTGAAGT TGTTAAAGTA 
AGTGTTGAAG ATAACTACAT CTTAGTTAAA GGTGGAGTTC CAGGACCTAA GGGCGGACTT 
GTTCAAATCA AACAAGCTAT CAAAGCCTAA
 
Protein sequence
MKSIFTTKVG MTQVIDEDGV ITPVTVLKAD ENVVVQVKTV ETDGYNAIQV GYMDKKEKNV 
TKPVREHFKK ANASTKRFLR EINFGEETPE LNLGDTITVE QFEAGDIVDV VATSKGKGTQ 
GAIKRWNYGR GPASHGSKSH RVAGARAAGS DPARVFKGRK GSGKMGNERV TVQNIEVVKV 
SVEDNYILVK GGVPGPKGGL VQIKQAIKA