Gene Apre_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1559 
Symbol 
ID8398371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1688973 
End bp1689512 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content36% 
IMG OID644995923 
Productribosomal protein L6 
Protein accessionYP_003153301 
Protein GI257067045 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000979408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGAA TAGGAAAACT TCCAATTGAA ATACCTTCTG GAGTAACAAT AGAAATTAAC 
GATCGCACAG TAAATGTTAA GGGACCTAAG GGCGAAGATA GCCTCGAAGT TTCAAAGAAT
GTAGGACTAG AATTAAATGA AAACGAACTT TTAGTTACAA TTCCAGAAAA CTACACAAAA
GCACAAAACG TCGATCACGG TTTATACAGA TCTCTAATTA ACAATCTTGT AGTTGGAGTA
TCAGAAGGAT ATAGCAAAAC ACTTCAAATC GAAGGAACAG GATATAGAGC AAACAAACAA
GGAAAGAATC TAGTAATGAA CTTAGGTTTC TCTCACCAAG TAACAATGCC AGATCCTGAA
GGAATCGAAG TAGAAGTGCC AAATGATAGA ACAATTGTAG TTAAGGGAAT TAACAAACAA
TTAGTAGGTC AACATGCTGC AAACATTAGA AACTGGAGAA AACCTGAACC ATACAAGGGT
AAGGGAATCA GATACGTTGA TGAGCATGTA AGACGTAAAG TTGGTAAAAC AGGTAAGTAG
 
Protein sequence
MSRIGKLPIE IPSGVTIEIN DRTVNVKGPK GEDSLEVSKN VGLELNENEL LVTIPENYTK 
AQNVDHGLYR SLINNLVVGV SEGYSKTLQI EGTGYRANKQ GKNLVMNLGF SHQVTMPDPE
GIEVEVPNDR TIVVKGINKQ LVGQHAANIR NWRKPEPYKG KGIRYVDEHV RRKVGKTGK