Gene Apre_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1549 
Symbol 
ID8398361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1684116 
End bp1684511 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content39% 
IMG OID644995913 
Productribosomal protein S11 
Protein accessionYP_003153291 
Protein GI257067035 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC AAAAGAAAAC TACTTCTAGA AGAAGAAGAG TCAAAAAAAA TGTTGAACGT 
GGCCAAGCTC ACATTAACTC AACATTTAAC AATACAATGG TGACCCTTAC AGATATGCAA
GGTAATGCAC TATCTTGGGC ATCTGCTGGA CAATTAGGAT TTAGAGGTAG CAGAAAATCT
ACTCCATTTG CAGCAAGCGA AGCAGCAGAT GTTGCAGCTA AGAAAGCTAT CGATCAAGGA
CTAAAAACTG TAGAAGTTTA CGTTAAAGGA CCTGGTTCAG GAAGAGAATC AGCAATTAGA
AGTCTACAAG CAGCAGGACT TGAAGTTACA ATGATCAAAG ACGTAACACC AATTCCTCAC
AATGGATGTA GACCTCCAAA AAGAAGAAGA GTTTAG
 
Protein sequence
MAKQKKTTSR RRRVKKNVER GQAHINSTFN NTMVTLTDMQ GNALSWASAG QLGFRGSRKS 
TPFAASEAAD VAAKKAIDQG LKTVEVYVKG PGSGRESAIR SLQAAGLEVT MIKDVTPIPH
NGCRPPKRRR V