Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1531 |
Symbol | |
ID | 8398343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1666310 |
End bp | 1666810 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644995895 |
Product | Helix-turn-helix type 11 domain protein |
Protein accession | YP_003153273 |
Protein GI | 257067017 |
COG category | [R] General function prediction only |
COG ID | [COG1827] Predicted small molecule binding protein (contains 3H domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000666791 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCA AAGACAGACA ACTAGAAATT ATAAGAATCT TACAAGATAG GACCAGCCCC ATATCTGGAG GAAGCTTAGC AGAGAAATTC GGCCTAAGTC GCCAGGTTAT AGTCAAGGAT ATCTCTATCC TTAAGGCAAG TGGCTATCAG ATAAAATCAA ACAACAAGGG ATACTGGCTA AGCCAGTCTT CGAAGATACA ATTTATCATA AAATGCTCCC ACAGGGACGA AGAAATAGGA GATGAGCTAA ACATCATAGT AGATAGGGGA GGAGAAATCC TAGATGTCTT CATCAACCAC AAGACCTATG GACTTATCAA GAAAGAGCTA AATATCAAAT CAAGAAAGGG CGTAGATGTC TTTATCAAAT CAATAGACGA ATCAACTCCC CTAAAAAATC TAACAGAAAA TATCCACTAT CACACCATAA GGGTGGATAA TGACTTCGCC AAAGAAAGTA TAGAGGATAA GCTTAGGGAA AAGGGGATAC TAATAGACTA G
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Protein sequence | MNIKDRQLEI IRILQDRTSP ISGGSLAEKF GLSRQVIVKD ISILKASGYQ IKSNNKGYWL SQSSKIQFII KCSHRDEEIG DELNIIVDRG GEILDVFINH KTYGLIKKEL NIKSRKGVDV FIKSIDESTP LKNLTENIHY HTIRVDNDFA KESIEDKLRE KGILID
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