Gene Apre_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1531 
Symbol 
ID8398343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1666310 
End bp1666810 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content38% 
IMG OID644995895 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_003153273 
Protein GI257067017 
COG category[R] General function prediction only 
COG ID[COG1827] Predicted small molecule binding protein (contains 3H domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000666791 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA AAGACAGACA ACTAGAAATT ATAAGAATCT TACAAGATAG GACCAGCCCC 
ATATCTGGAG GAAGCTTAGC AGAGAAATTC GGCCTAAGTC GCCAGGTTAT AGTCAAGGAT
ATCTCTATCC TTAAGGCAAG TGGCTATCAG ATAAAATCAA ACAACAAGGG ATACTGGCTA
AGCCAGTCTT CGAAGATACA ATTTATCATA AAATGCTCCC ACAGGGACGA AGAAATAGGA
GATGAGCTAA ACATCATAGT AGATAGGGGA GGAGAAATCC TAGATGTCTT CATCAACCAC
AAGACCTATG GACTTATCAA GAAAGAGCTA AATATCAAAT CAAGAAAGGG CGTAGATGTC
TTTATCAAAT CAATAGACGA ATCAACTCCC CTAAAAAATC TAACAGAAAA TATCCACTAT
CACACCATAA GGGTGGATAA TGACTTCGCC AAAGAAAGTA TAGAGGATAA GCTTAGGGAA
AAGGGGATAC TAATAGACTA G
 
Protein sequence
MNIKDRQLEI IRILQDRTSP ISGGSLAEKF GLSRQVIVKD ISILKASGYQ IKSNNKGYWL 
SQSSKIQFII KCSHRDEEIG DELNIIVDRG GEILDVFINH KTYGLIKKEL NIKSRKGVDV
FIKSIDESTP LKNLTENIHY HTIRVDNDFA KESIEDKLRE KGILID