Gene Apre_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1493 
Symbol 
ID8398305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1627405 
End bp1628007 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content42% 
IMG OID644995857 
Productsugar transferase 
Protein accessionYP_003153235 
Protein GI257066979 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAA ATTACGTAAA GAATATATTG GATAGGATTT TGGCTCTTTT GGGTCTTATA 
ATCCTCTCTC CAATATTTTT GCTTACAGCT CTCGCCATCA AAATCGAAGA GCCCAGGGGA 
AAAGTCTTCT TCATCCAGGA TAGGTCTGGT AAGGAAGGTA AGGCTTTCTC CTGCATCAAA 
TTTAGGTCGA TGTCGACAGA GGCGCCAAAC AACGCCGCAA CTTGGGAGCT TGATAATGCG 
GATAGCTACA TAACAAAAGT GGGCCGTTTC ATCAGAAAGA CATCCATAGA CGAGCTTCCC 
CAGCTTATAA ATATAATAAG GGGAGATATG AGCATAGTTG GCCCAAGGCC GGTTATCCTT 
AAGGAAGAAG AGCTAATTAA CTTAAGGAGA AAGTTCGGTG CCTTGAGTGT AAGGCCAGGA 
ATTACAGGAC TTAGCCAAAT TTCGGGCAGG GATAATCTCC CTCCCAAGAA AAAGGCCGAG 
ACAGATGGTG AGTATGCAGC AAATGTAACT TTCTTAAATG ACTTAAAAAT AATATTAAAA 
ACAATCCCCC AAGTCCTATC TGGAGAAGGG GTTAGCGAAG GAAAGAAGGA AGATTTTAGG 
TAA
 
Protein sequence
MYENYVKNIL DRILALLGLI ILSPIFLLTA LAIKIEEPRG KVFFIQDRSG KEGKAFSCIK 
FRSMSTEAPN NAATWELDNA DSYITKVGRF IRKTSIDELP QLINIIRGDM SIVGPRPVIL 
KEEELINLRR KFGALSVRPG ITGLSQISGR DNLPPKKKAE TDGEYAANVT FLNDLKIILK 
TIPQVLSGEG VSEGKKEDFR