Gene Apre_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1345 
Symbol 
ID8398152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1447127 
End bp1447579 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content31% 
IMG OID644995707 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003153089 
Protein GI257066833 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000142864 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA AAAATAAGGA TAATATTTTA GCAGAGATTG TCAAAAAAAC CAAGCTTCAC 
TTTTTTAGGT CGGTCTTTAA AAATTACCAG GCCTCTTCAT TAAGTCTAGG TGATAGTATG
ACTTTAGAAG TTATAGAATA TCTTGAAAGT CCAAGCATTA ACGATTTAGT CAAGTTTTTG
TATATGTCTC AGCCCAATGT TTCTTATAGG ATTAATATCT TACAGAAGAA GGGCTATATA
ACAAAGATTA AGTCAATGGA GGATGCAAGG ATTACTCACA TAGTCTTAAC AGATAAGTAC
TTTTCATATA AAAGGAAGAA AAATGAGCTT ACTGCAAGGG TTCTTAGAAA TGTAGAAGAT
AAACTTGATA AAGAAGAGAG AGAATATCTA TATGATAATT TGGACCTTGT AAATAGGGAG
CTTGAAAAAG AGCTTAGAGA ATTTCTTAAA TGA
 
Protein sequence
MNKKNKDNIL AEIVKKTKLH FFRSVFKNYQ ASSLSLGDSM TLEVIEYLES PSINDLVKFL 
YMSQPNVSYR INILQKKGYI TKIKSMEDAR ITHIVLTDKY FSYKRKKNEL TARVLRNVED
KLDKEEREYL YDNLDLVNRE LEKELREFLK