Gene Apre_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1344 
Symbol 
ID8398151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1446399 
End bp1446953 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content33% 
IMG OID644995706 
Producttranslation initiation factor IF-3 
Protein accessionYP_003153088 
Protein GI257066832 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000182733 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCCCGC TTTTTTTAAT ATATGGAGGT ATACTTATAA AAGATTTAAG AATAAATGAT 
GAAATTAGAG CTAAGCAAGT AAGACTTATT GATGAAAATG GTAATCAGGT AGGAATAGTT 
GACCTAAACA GAGCCCTAGA CATGGCTTAT GATAGCAAAC TTGACCTAGT GTTGATGAGC 
CCAAAGGCTA AGCCACCCGT TACTAGAATA ATGGATTACG GCAAGTTCAA ATATGATCAA 
GAGAAAAAAG AAAAAGAGAA TAGAAAAAAA CAAAAAAATG CTCAACTAAA AGAAACAAGA 
TTTTCTCTTA ATATAGAAGA TAATGACTTG CAAACAAAAG CAAATCAAAG CATGAAATTC 
TTAAATAACG GGGATAAAGT AAAAGTTTCT ATAAGATTCC GTGGTAGAGA GCTTGGACGT 
AAAGAGCCTG GCTATGAATT GATGGATAAG TTTAAGACAA TGCTAGGAGA TTCCTACAAG 
GTTAGCAAAA AACCAAAAAT GGAAGGAAGA TCTCTAGTAA TGTTTCTAGA ACCAAACGAC 
GAAAAAGGAG AATAA
 
Protein sequence
MCPLFLIYGG ILIKDLRIND EIRAKQVRLI DENGNQVGIV DLNRALDMAY DSKLDLVLMS 
PKAKPPVTRI MDYGKFKYDQ EKKEKENRKK QKNAQLKETR FSLNIEDNDL QTKANQSMKF 
LNNGDKVKVS IRFRGRELGR KEPGYELMDK FKTMLGDSYK VSKKPKMEGR SLVMFLEPND 
EKGE