Gene Apre_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1324 
Symbol 
ID8398116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1415335 
End bp1415982 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content36% 
IMG OID644995671 
Productelectron transport complex, RnfABCDGE type, E subunit 
Protein accessionYP_003153068 
Protein GI257066812 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000680415 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC AAATTGATAG ACCAATAGAG AATAAAAAAG AAAAGAAAGC TCCTAAAGAA 
AATTTAGGAA AAGTCTTTAT CGAAGGAATA TTTGCTAATA ACCCAGTTTT CGTTCAAACA
GTAGGTATGT GTTCAGTTCT TGCCATATCT TCTTCCTTGA TCAATGCTAT AGGAATGGGA
GTATCAGTAA TATTCGTAGT AGTAATGAGT AACTTGGTAA TATCCTTACT AAGAAATTTC
ATTTCAGATG AAATAAGAAT CCCTGCCTTT ATCGTAATTA TCGCAGGCTT CGTAACAATG
GTACAAATGG CAATCAAAGC ATACTTGCCA GCCCTAGATG AATCCTTGGG TATCTTTATT
CCACTAATAG TAGTTAACTG CTTGATCCTT GCTCGTGCGG AAGGTTTTGC TTCAAGTCAC
GGACCAGTAG CATCAATCGT AGATGGACTT GGCCAAGGAC TAGGATACAC ATTTGCAATT
TCCCTTCTAG CTTTCTTTAG AGAGCTTCTA GGAGCAGGAA CACTTTTCGG AGCTCAAATA
ATTCCAGAAG CATACACAAT CGGATTCTTA CAACAACCAG CATCATCATT TATAGTTCTT
GGTATGTTAG TTGCAGCATT TAATGCTATT TCAAAGAAGA GAAAATAA
 
Protein sequence
MENQIDRPIE NKKEKKAPKE NLGKVFIEGI FANNPVFVQT VGMCSVLAIS SSLINAIGMG 
VSVIFVVVMS NLVISLLRNF ISDEIRIPAF IVIIAGFVTM VQMAIKAYLP ALDESLGIFI
PLIVVNCLIL ARAEGFASSH GPVASIVDGL GQGLGYTFAI SLLAFFRELL GAGTLFGAQI
IPEAYTIGFL QQPASSFIVL GMLVAAFNAI SKKRK