Gene Apre_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1308 
Symbol 
ID8398098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1401381 
End bp1402466 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content34% 
IMG OID644995653 
Producthypothetical protein 
Protein accessionYP_003153052 
Protein GI257066796 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000375715 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTAC ATACTTTTAA AAATACCTTT AAGCTCCTAA TAAGGGATAA GAGCCTACTT 
TTTTGGTCTT TAGTTTTTCC TATAGTCTTG GGATTTTTCT TTACCATAGC CTTGGGAAAT
GTTACAAAGT CTATGAACTT TGAGCCGATA GATCTTGTAG TAAAAGAAGA CCTAAGAGAA
GATAAGTATT TTGATGATTT CCTTAAAGAG CTTGAAGATG AAGATATAAT TATTATCCAC
TCTGAAAAGA GTATTGATGA TGAAGGAATT ACTGCCTATA TCAAAGACCG TGACAAGATA
GTTTTTAAGA AATCTGGTAT CTATGAGTCT ATCATAGAAG ATATTATTAA CGCTTATCTT
AGAAAGGGGG CTATGGCAGA AAAGATTTTA AGGAAGAATC CTACTTTTGA CCTAAGCTAT
TTGAGCCATA GAAAAAGCCA TATTATTGAT AAGTCAAAGC GTAATCTCGA TTTTGTAAAT
ACGTTTTTCT ACTGCTTGAT AGGTATGCAG GCTATGTATG GTTTTACTTA TGGGCTTCTT
ATTATTTATA GATTTGAGGC CAATCTTTCC ACTCTTGCCA AGAGAAATGC CATAGCTCCT
TTAGATAGAC TTACAAGCCT TCTATCATCT ATCTGCGTTG GATTTATTAT TAACTTCTCC
GTTGTTTTAT TTACCATGCT TGTTTTTAAT AAGTTGTATG GGGTAGACTT TTCTAATAAG
CTCGGACCGC TTATTTTAAT AGGGGGTCTT GGAAGTCTTT TTGGTGTCTT GTTTGGGATT
CTTATAGGAC TTGCGTCTAA GGCAAGTGTG GAGGTCAAAA ACGGACTAGG GATTGCTATA
AGCATGGTTT TATCATACTT ATCAGGAATG ATGGATTCTT CTATGAAGCT TATGATCGAG
GAAAACGCTC CAATTATTAA TAAATTCAAC CCAATTGCCT TGATAAATGA TGCAATCTAC
AGCCTCTATT ACTATGATGG ATACGATAGG TATTTGGAAA ATGTTAAGTA TTTATTAATA
TTGATAATAA TTTTCCTAGG TCTCACTCTA ATTTTAACAA GGAGCAGGCA GTATGATAGT
CTTTAA
 
Protein sequence
MFLHTFKNTF KLLIRDKSLL FWSLVFPIVL GFFFTIALGN VTKSMNFEPI DLVVKEDLRE 
DKYFDDFLKE LEDEDIIIIH SEKSIDDEGI TAYIKDRDKI VFKKSGIYES IIEDIINAYL
RKGAMAEKIL RKNPTFDLSY LSHRKSHIID KSKRNLDFVN TFFYCLIGMQ AMYGFTYGLL
IIYRFEANLS TLAKRNAIAP LDRLTSLLSS ICVGFIINFS VVLFTMLVFN KLYGVDFSNK
LGPLILIGGL GSLFGVLFGI LIGLASKASV EVKNGLGIAI SMVLSYLSGM MDSSMKLMIE
ENAPIINKFN PIALINDAIY SLYYYDGYDR YLENVKYLLI LIIIFLGLTL ILTRSRQYDS
L