Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1289 |
Symbol | |
ID | 8398079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1386195 |
End bp | 1388249 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644995634 |
Product | DNA topoisomerase I |
Protein accession | YP_003153033 |
Protein GI | 257066777 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.781177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAAGA ACCTAGTAAT AGTAGAGTCT CCAACCAAGG CCAGATCCAT CTCAAAGATG CTCGGAAGAA ACTACAAGGT AATGGCAACA GTAGGCCACC TCCGTGATCT TCCAAAGAGC AAGTTTGGAG TGGATATAGA AAATAACTTT GAACCAGAAT ATATCAAGGT TAGGGGACGA GCAAAGACTA TAAATGAACT AAAAAAAGAA GCGAAAAAGG CAGAAAATGT CTACCTTGCG ACAGACCCGG ATAGGGAAGG AGAGGCCATA AGCTGGCATT TACAATTTCT CTTAGACCTT GACCCTGAAG CGAAAAACAG GGTAGAGTTC CACGAGATAA CCAAAGAAAA TGTCAAGAAC GCCATCAAAA ACCCAAGGAA AATCGACCAG AACCTAGTTG ACGCTCAACA GGCAAGGCGA GTAATGGATA GGATTGTAGG TTACGAGATA AGCCCAATCC TCTGGAAGAG GGTCAAGGCA GGTTTATCTG CAGGTCGTGT CCAATCAGTT GCCCTAAAGC TTATAGTAGA TAAGCAAAAG GAAATCGACG ATTTTGTTCC AGAAGAATAC TGGACTATAA CAGCCCACCA CAAGGAAGGT AGGGAGAAAT TCGACTCAGA ATTCTATGGA CAAATCAACA AGAAAATAAA AATAAGCAAT GAAAACGGAG CGGATAAGGT CCTAAATAAA ATCGATAAGG ATAAGTTTGA AGTTGTAAAA ATCACCAAGA CTAAAAAGAG AAGAAAGCCT CAAAAGCCTT ACACAACCTC AACCCTCCAA CAAGATGCCT CCAATAGATT AGGGTTTTCT ACAAGATTTA CCATGCAGCT AGCCCAACAG CTCTTTGAGG GTATAGATGT AGGAGATGGA AGTGTGGGTC TTATTACCTA TATGAGAACT GACGCTAACA GGATCTCTAA GGAGATCGTA GGCGAAGCCC TCTCATATAT TAAGGAAAAA TACGGACCGG AATATGCTGG CAAGGGAAAT ACCTACGGGG GCAAGAAAAA GGGCAGCCAA GATGCCCACG AGGCCATAAG ACCTACCTCT ATTAGGAGAA ATCCTCTAGA GATTAAGGAA TACCTAACAG ATCAACAATA TAAGCTATAC AAGATGATTT GGGAAAGAGT CGTAGCAAGC CAGATGACAG ATTACGAATT CCTATCAACC CAAGTCCTAT TCGACAACAA TTCCCTAATC TTTAAGACAA ACGGGAAAAT CACCCTATTT GAAGGTTTCA ATAAATTGGG AGCAAATAAA GAAAACGAAA ATATCCTACC AGAGCTTAAG GAAGGGGATG TGATAAGTGC TGAGTCAATC GATAAGGACC AACACTTCAC TAAGCCTCCA GCAAGATATA CTGAGGCAAG TCTTGTAAAG ACCCTAGAAG AATTCGGCAT AGGTAGACCT TCAACCTATT CTGCTACCAT CAACCAAATC ATCTCAAGAA ACTACGTAGA ACTTGAAGGA AGATCAATCT TCCCAACAGA TCTAGGAAAA ACCGTAAATA CCTTCCTCCA AGAAAACTTT GACGATGTAA TAAACGTAGA GTTCACCAGG GAAATGGAAG ATGCCTTGGA TAATATCGCA GAAGGAGATA GATTCTGGAA AGAAACATTA AAATCCTTCT ACAAGGACTT CGAAAAAGAC ATGAAGGGTG TCAAAAAGGA CGGCAAGGAC TACAAGGTAA GAGATGAAAT CTTAGAAGAA AAATGCCCAA AATGCGGAAA GCCTCTTGCC ATCAAACACG GAAGAAACGG GAAATTCATA GGCTGTACCG GCTTTCCAGA TTGTAACTTT ACCAAATCAA TAGTAAAATC AACCGGAGTC AAATGCCCAG AATGTGAAGA CGGAACGATA ATAGAAAAAG TCAGCAAAAG AGGCAAGAGA TTCTACGGCT GTGACAACTA CCCAAAATGC GACTTTGCCC TATGGGACCC ACCAACAGGA GAAAAATGTC CAGAATGCGG CTCTCTCCTA ATCCACAAGA AAAACAGGTC CACAGACGAA ATAAAATGCT CCTCCTGTGA CTATGTCAAA GAAAAGAGGA GATAA
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Protein sequence | MAKNLVIVES PTKARSISKM LGRNYKVMAT VGHLRDLPKS KFGVDIENNF EPEYIKVRGR AKTINELKKE AKKAENVYLA TDPDREGEAI SWHLQFLLDL DPEAKNRVEF HEITKENVKN AIKNPRKIDQ NLVDAQQARR VMDRIVGYEI SPILWKRVKA GLSAGRVQSV ALKLIVDKQK EIDDFVPEEY WTITAHHKEG REKFDSEFYG QINKKIKISN ENGADKVLNK IDKDKFEVVK ITKTKKRRKP QKPYTTSTLQ QDASNRLGFS TRFTMQLAQQ LFEGIDVGDG SVGLITYMRT DANRISKEIV GEALSYIKEK YGPEYAGKGN TYGGKKKGSQ DAHEAIRPTS IRRNPLEIKE YLTDQQYKLY KMIWERVVAS QMTDYEFLST QVLFDNNSLI FKTNGKITLF EGFNKLGANK ENENILPELK EGDVISAESI DKDQHFTKPP ARYTEASLVK TLEEFGIGRP STYSATINQI ISRNYVELEG RSIFPTDLGK TVNTFLQENF DDVINVEFTR EMEDALDNIA EGDRFWKETL KSFYKDFEKD MKGVKKDGKD YKVRDEILEE KCPKCGKPLA IKHGRNGKFI GCTGFPDCNF TKSIVKSTGV KCPECEDGTI IEKVSKRGKR FYGCDNYPKC DFALWDPPTG EKCPECGSLL IHKKNRSTDE IKCSSCDYVK EKRR
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