| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1245 |
|---|
| Symbol | |
|---|
| ID | 8398034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1331176 |
|---|
| End bp | 1332480 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644995590 |
|---|
| Product | sodium:neurotransmitter symporter |
|---|
| Protein accession | YP_003152990 |
|---|
| Protein GI | 257066734 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000515099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TTAATTCAAA AATTGGTTTT ATATTAACAG CGGTTGGTTC TGCTGTCGGC
ATGGCAAACG TCCGGGGTTT TCCTTACAAG TTCCAGCAGG GAGGTCTAGT ATTTTTCCTA
GCTTATTTGT TATTTATAGT CATTTTTTCC TATGTGGGAC TATCTAGCGA GTTTGCAGTT
GGTAGGCTTG CAGGTACTGG AACCTTAGGT GCTTATTACA AATCTTTTAA AAGCAAGAAT
AAGGATACCC TTATAGGAAA GTACATAGGA TTTGTCCCTC TGTTGGGTTC CTTGTTTATA
GCAGTAGGCT ATGCTGTAAT TGTTTCTTAT ATAAGTAAGG CCTTGTTGGA TTCTCTTACA
GGATCTTTGA TGCATGCTGA TACTACTAAT TGGTTTGATA GCTTCTCCCA AAAGCCTTAC
TCAGTAGTTG GGTTTCATTT TGCAATTATC GTGATAACTC TTATTACTTG TATAGGAGGG
GCTAGGACGA TAGAGAAATC TAACAAATTT ATGATGCCTA CTTTCTTTGT TCTTTTTGTC
ATTTTGGCAA TTAAGATTTT AACACTTGAT GGGGCAATCG AAGGCTATAA GTATATGTTT
AGATATGATA GCGAAGCTTT GAATATCAAT ACCATAGTCC AAGCTATGGG CCAGGCCTTC
TTTTCTCTTT CTGTAACGGG ATCTGGGATG ATAGTTTGTG GAGCCTACCT AAGTAAGGAT
GAGGATATTG TATCTTCTTC CAAGATGACA GGCCTGCTCG ATACTATAGC AGCACTCTTA
TCATCTTGCG TTATAATCCC TGCTATCATG GTCTATAGAA TGGATCAGGC AGGTGGACCA
GGTTTATTGT TCCAAGTCTT ACCTACCATC CTACAAGATA TGTTCTTAGG TAGATTATTT
GCAATAATCT TATATCTTGC GGTAATACTC GCAGGCATTT CATCCCTACA GAATATGTTT
GAGGTAGTAG CAGAGTCTCT TATGAACAGG TATCCAAAGA TAAAAAGAAA CCTAGCCCTA
GTCCTAATTG GAATTTTCGT ATTTGGCTTG GGAGTCAATA TGGAAATGAT TAGCCAATGG
GGACCATTTA TGGACATAAT CTCTATCTAC ATCATCCCAA TTGGAGCTTC TATCGGAGCT
GTAACATGGT TTTATGTATT GGCTAAGGAT AAGCTTATTG GAGAGATTAA TCAAGGATCT
GAGAAAAAAT ACGGGGATAA GTGGTACAAG ATTGGAAAAT ATATCTACAC ACCAATTGCC
ATTATCCTTT GTGTCATAGC ACTAATATTT AAAGTTTCAT TCTAA
|
|---|
| Protein sequence | MNKFNSKIGF ILTAVGSAVG MANVRGFPYK FQQGGLVFFL AYLLFIVIFS YVGLSSEFAV
GRLAGTGTLG AYYKSFKSKN KDTLIGKYIG FVPLLGSLFI AVGYAVIVSY ISKALLDSLT
GSLMHADTTN WFDSFSQKPY SVVGFHFAII VITLITCIGG ARTIEKSNKF MMPTFFVLFV
ILAIKILTLD GAIEGYKYMF RYDSEALNIN TIVQAMGQAF FSLSVTGSGM IVCGAYLSKD
EDIVSSSKMT GLLDTIAALL SSCVIIPAIM VYRMDQAGGP GLLFQVLPTI LQDMFLGRLF
AIILYLAVIL AGISSLQNMF EVVAESLMNR YPKIKRNLAL VLIGIFVFGL GVNMEMISQW
GPFMDIISIY IIPIGASIGA VTWFYVLAKD KLIGEINQGS EKKYGDKWYK IGKYIYTPIA
IILCVIALIF KVSF
|
|---|
| |