Gene Apre_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1230 
Symbol 
ID8398019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1313262 
End bp1314455 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content39% 
IMG OID644995575 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003152975 
Protein GI257066719 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000170025 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACG CAAAAGTTAA AAAATCATTT TTTAACAGCT TACTTTTTAA GCTAATTATA 
GCCATTGCTA TAGGAATTTT CCTAGGTAAT ATTGCAAACG AAGGTGCAAT CCAAGTGATT
TCTACAATCA AAAATATTTT GAGTAATCTA ATCAACTACA TAGTACCTAT CATAATCCTT
GCATTTATTA CCCCAGCTAT AGTATCCTTA AACGAAAGTG CGGGTAAGGT CTTATCCCTA
ACCCTAATTA TTTGTTATCT TTCATCAGTG GGAGCTGCTC TTTTCTCCTT TATCGCTGGA
AAAGCTATAA TCCCACACCT ACACATAGTT AGTGCAACAG AAGCTGGAAA GAAAATCCCA
GAGATTTTAT TCCAAATGGA TATCCCTTCC ATCATGCCTG TAATGACCGC TCTTGTCACT
GCGATTCTCT TTGGTCTTGC AGTAATATGG ACCAAATCTG AAACTTGGGC CAATCTTTTA
AGAGAGTTCA ACAATATGGT TCTTGAGATA GTAAATAGAG TAATAATTAA AGTACTACCT
TTTTATATTG CGACAACCTT CGCAGAACTT TCCTATGAAG GAGTAATCCT AAGCCAATTT
CCAGTATTTC TCAAGGTCAT AGTAATCGTA ATTTTGGGCC ATTATATTTG GTTAGCCCTA
CTTTATGGTC TCGGCGGAAT TTTTTCTAAG ACAAATCCTA TAGAAGTCTT GAAATATTAT
CCACCAGCCT ATGTTACTGC CCTTGGAACA ATGTCTTCAG CTGCAACACT TTCAGTTTCA
CTTCAGTGTT CAAGAAAGGC AAAGACCCTA GATCCAAAGA TTAGAGACTT CGTAGTTTCA
CTTTGCTCTA ACACCCACCT TTGTGGATCA GTCCTTACAG AAACATTTTT CGTAATGATA
GTAAGCCAAG TCCTCTACGG CTCTCTTCCA AGCACGGGAA ATATGATTCT TTTCATCCTC
CTTCTTGGAA TATTTGCTAT AGGAGCACCT GGAGTTCCAG GAGGAACTGT TATGGCCTCT
TTAGGTCTTA TCACTTCTAT TCTTGGCTTT GATGCGACAG GAACTGCCCT AATCCTTTCA
ATATTTGCCC TCCAAGATTC CTTCGGAACA GCTTGCAATA TCACAGGAGA TGGAGCCATC
GCCCTAATGG TTACTGGACT TTTGGGTAAG GTTCCAAACA AGGCAAGGTC CTAG
 
Protein sequence
MSDAKVKKSF FNSLLFKLII AIAIGIFLGN IANEGAIQVI STIKNILSNL INYIVPIIIL 
AFITPAIVSL NESAGKVLSL TLIICYLSSV GAALFSFIAG KAIIPHLHIV SATEAGKKIP
EILFQMDIPS IMPVMTALVT AILFGLAVIW TKSETWANLL REFNNMVLEI VNRVIIKVLP
FYIATTFAEL SYEGVILSQF PVFLKVIVIV ILGHYIWLAL LYGLGGIFSK TNPIEVLKYY
PPAYVTALGT MSSAATLSVS LQCSRKAKTL DPKIRDFVVS LCSNTHLCGS VLTETFFVMI
VSQVLYGSLP STGNMILFIL LLGIFAIGAP GVPGGTVMAS LGLITSILGF DATGTALILS
IFALQDSFGT ACNITGDGAI ALMVTGLLGK VPNKARS