Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1227 |
Symbol | |
ID | 8398016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1310346 |
End bp | 1311155 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644995572 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003152972 |
Protein GI | 257066716 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000377122 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAA AATTTAAAAT TTCAAATTTA TATTTAATAT TTATCTTTAT CCTCTTATAC CTGCCCATAG CCTATCTAAT ATTTTATTCC TTTAATAGGG GGACCAATAT GAATTCCTTT GTGGGATTTT CCCTAGACCA TTACAAGGAA GTCTTCCATG ATACTAGGCT TTGGACGATT GTGATAAATA CCATAGTCTT GGGGCTTTTG TCAAGCCTTG TAGCGACAAT TATTGGAACT TGTGGGGCCA TAGCTATCTA TTATCTAAGA AGCGATAGGA TTAGAAAAAG AGTATTAAAC TTTAACTCAG TCCTTATGGT TATGCCTGAT GTAATGATGG GAGCAAGCTT TTTGGTTCTC TTTACCTTTC TTATAAAGAT ACCGATGGGC TTTATGACGG TTTTACTCTC CCATATAGCC TTCTCGATTC CCATTGTGGT CCTTATGGTA TTGCCAAGAC TTTATAGTCT GAATCCTTCC ATGATTCTTG CGGCAGAAGA TTTAGGTGCA AGTGATATAA CTATCCTTAA CAAAATCATC CTACCAAATA TTACAAGTGG GGTACTTACA GGATTTTTTA TGGCCTTGAC CTACTCCTTG GATGACTTTG CAGTTACCTT TTTCGTTACA GGATCTGGCT TTACAACCCT TTCTGTTGAG ATTTACTCCA GAGTTAGGAC GGGGATTTCT CTTGAGATAA ATGCCCTATC GACCTTGATG TTTCTGGCAT CTCTCTTTTT AGTAGTTATT TATTATTTTA TTAGCCAAAG GGAGATGAAG ATAATGGAAA GGAGAAAAGT AGATGAATAA
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Protein sequence | MKRKFKISNL YLIFIFILLY LPIAYLIFYS FNRGTNMNSF VGFSLDHYKE VFHDTRLWTI VINTIVLGLL SSLVATIIGT CGAIAIYYLR SDRIRKRVLN FNSVLMVMPD VMMGASFLVL FTFLIKIPMG FMTVLLSHIA FSIPIVVLMV LPRLYSLNPS MILAAEDLGA SDITILNKII LPNITSGVLT GFFMALTYSL DDFAVTFFVT GSGFTTLSVE IYSRVRTGIS LEINALSTLM FLASLFLVVI YYFISQREMK IMERRKVDE
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