Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1161 |
Symbol | |
ID | 8397950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1242335 |
End bp | 1243408 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644995508 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_003152908 |
Protein GI | 257066652 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATG ATAACTTAAT GAGAGAATGT TTCGACTTAG CCCGTAAGGG GGCAGGAAAA GTTTTGACAA ATCCTATGGT TGGAGCAATT CTTATTAAAA ATGGAGAGAT AATAGCTAAG GGCTATCACA AAAGCAATAC CTGCGACCAT GCAGAAATCG ATTGCTTTAA TAATCTTAAG GAAAGCGCAG AAGGAGCTAC TCTGATAGTA AATCTCGAGC CTTGTTCCCA TTTTGGCAAG CATCCTCCCT GTGTCGATGA AGTCATAAAA AGGAAAGTTA AAAGGGTTGT TATCGCAAAT CTTGATACCA ATCCCAAGGT AGATGGTCTT AGCAAATTAA AGGAAGCCGG AATTGAGGTC ATTACTGGAG TCCTAGAGGA TGAAGGAAGA AAATTAAATG AAAAGTTTTT CTTCAATATG GAAAATAATA GACCTCTAGT AGCTTTAAAA TATGCTCAAA GCCTGGATGG GAAAATCGCT ACAGCTTCCT TTGATTCTAA GTGGATTACT AATGAAGAAT CTAGAGCCTA TGTTCACAAA CTAAGGAGCG AATATGACGC AATCCTAGTT GGAGCTAACA CCCTAAGGCA GGATAATCCA AGGCTTACTT CAAGGATTGA AGGGGGAGTT AACCCTTATA GAATTATCCT TTCTGATAAG CTTGATATTG ATAAAGACAG AGAAGTCTTT AGGGAAAATG CTGATAAGAA AACTTATATC GCCACAATTT CTGATAAAGA TATAGATATA AATGCAGAAA TTATAAGATG TAAGGAAAAA GACGGCAGGG TTGATCTTAA AGACTTGCTT GATAAGTTAT ACGAGAGAAA TATCGGATCA GTTCTTGTAG AAGGAGGGTC TATCATAAAT AACTCTTTCC TAGAAGAAGA CCTAGTAGAC AAAATCTATC AATTTATGGC TCCAATAATA GTATCGGGCC TTGATTCAAG GTCTGCTTTT ATAGGAGAAG GGGCCAAGGT CATAAAAGAT GCCAAGAGAT TTTCCATAGA TGATATCAAA AGATTTGGTA CTGATGTAAT GTTTGAGGTA AATAATGTTT ACAGGAATAG CTGA
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Protein sequence | MNYDNLMREC FDLARKGAGK VLTNPMVGAI LIKNGEIIAK GYHKSNTCDH AEIDCFNNLK ESAEGATLIV NLEPCSHFGK HPPCVDEVIK RKVKRVVIAN LDTNPKVDGL SKLKEAGIEV ITGVLEDEGR KLNEKFFFNM ENNRPLVALK YAQSLDGKIA TASFDSKWIT NEESRAYVHK LRSEYDAILV GANTLRQDNP RLTSRIEGGV NPYRIILSDK LDIDKDREVF RENADKKTYI ATISDKDIDI NAEIIRCKEK DGRVDLKDLL DKLYERNIGS VLVEGGSIIN NSFLEEDLVD KIYQFMAPII VSGLDSRSAF IGEGAKVIKD AKRFSIDDIK RFGTDVMFEV NNVYRNS
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