Gene Apre_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1158 
Symbol 
ID8397947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp1240077 
End bp1240538 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content40% 
IMG OID644995505 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003152905 
Protein GI257066649 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGT TTAGTGCTAA TTTAATTTCA AATGACAAAA AATATGCGGT TTTGGTTGCG 
AGATTCAACC ACTTTGTAAC AGATAGGCTA GTTGAGGGTT GTCTTGATAC CCTAAAAAGA 
CACGACACAA AGGAAGAAAA TATCGACCTA ATTAGGGTTC CAGGAGCCTT TGAGATTCCT 
TTAGTTGCCA AGAAACTTGC CAAAAAGGAC GAATACGATG CAGTAATCTG CCTTGGAGCA 
GTTATACGTG GAGATACACC TCACTTTGAC TATGTTTGTG CAGAAGTATC TAAGGGAGTC 
GCCAATGTAA GCCTTGATAG TGATAAGCCT GTAATATTTG GTGTAATTAC AGCAGATACA 
ATCGATCAAG CCCTTCAAAG ATCTGGTGTT AAGGCTGGTA ATAAGGGAAG TGAAGCAGCT 
CTTGCAGCAA TCGAGATGGC AAATCTAATG GATATCTTAT GA
 
Protein sequence
MREFSANLIS NDKKYAVLVA RFNHFVTDRL VEGCLDTLKR HDTKEENIDL IRVPGAFEIP 
LVAKKLAKKD EYDAVICLGA VIRGDTPHFD YVCAEVSKGV ANVSLDSDKP VIFGVITADT 
IDQALQRSGV KAGNKGSEAA LAAIEMANLM DIL