| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1136 |
|---|
| Symbol | |
|---|
| ID | 8397924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1221069 |
|---|
| End bp | 1222703 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644995482 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_003152883 |
|---|
| Protein GI | 257066627 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000106361 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA TTTCTGATAG CAAGATAAAT CAAATACTAG AAAGCTCAAA TATAGTTGAT
ATTATAGGTG AGTATGTCGA TCTAAAAAGA GCAGGCTCAT CCTTTAAGGG ACTGTGCCCC
TTCCATAATG AGAAAACACC ATCTTTCACG GTAGATGAGA AGAAACAACT TTTTCACTGC
TTCGGCTGTG GAGCAGGGGG AGATGTTGTT TCTTTTATAA TGCAAAAAGA AGGACTTTCC
TATCCAGAAA GCCTAAAATA TCTTGCGGAT AAGGCTGGCA TTAGCATTGA CTACACCGAA
AATCCTGGAG TAAATAAAAA GAATAAGGAG CTTTACGATA TCAATAAAGA TATTATGATG
TTTTTTTACA AGAATCTCCT AACCGACAGA AAAGCCCAAG CCTATCTTAA GAGTCGTGGT
CTATCTAGTA AGATTGTAAA TACCTTTATG CTAGGTTATG CAAGAGATTC ATGGGATGAT
TTGTATTCCT ATATAAGAAA GAAAAATTAT AGTGAAAAGG ACCTGGACGA TCTTGGTCTT
ATCAAGAAAT CCTCTAAGGG TAATTACTAT GATAAGTATA GGGATAGGAT TATATTTCCT
ATTATTAATC ATTTCGGTAA GGTTATTGGA TTTGGGGGAA GAGCTGTCTC AGGCCAGATG
CCAAAGTATC TCAATTCACC AGAATCTAGC ATCTTTAAGA AAAGATATAA TCTATACGGG
CTAAATATCT ACAAGAGACA GAAAAGAAAA GAGCTTATAC TTGTAGAAGG TTATATGGAT
GTCATAGCTC TCAATAACCA TGGTCTAGAC ATTGCTGTAG CATCTTTAGG AACAGCCTTA
ACTATAGATC AGGCCAAGCT AATGAAAAGA TATTCTGATG ATATATATAT TTGCTATGAC
CAGGATAATG CTGGAGTTAA GGCGACCGAG AAGGCAATTG AGATTTTTCA TGAGATAGGG
ATAAATCCTA GCGTAATTGT CTTAGATGAT GGAAATGACC CGGACGATTT CATTAAGGCC
AAGGGCAAGG ATGCCTTTGA GGAAAAAATA GCTGATGCCC AAGATTCTTA CAATTATAAA
TACAATAAAA TCCTAGATGA ATATAGTTCG GCAAAGCCAG CAGAGAGGTT TGATAAGCTA
AATTTATTCG TTGATTTTCT CGCTTCTATT AAACAGGAAT TGACTCAAGA AATCTTTATA
AACAACGTAA GCAAGCTATT TGACATAGAC AAGACTACTT TAAAACAAGC TGTTTCAAGG
TATAATAAAG ATACTGACTT AAAATATAGT AATAAGAGTA AGTTTAATAA GAAAGAAAAA
ATTATAGTAG AAAGTACCAA TAAGGACTTT AGAATAAACG AATTAGAAGT TTTAAGATTG
TTTTTCAATC AGAGGTCTGA CTATGAGAAA GATAGAGACT TTTTCGATAG GGCTATAGAA
AACGAGAAGA TAAACAATGT TAAGACTTTT TTAAAAGAAA AGGATGTTAG TAAGTTTGAC
CTTTCAGATG AGGACTACAA GTATATTTTG GATTATATTA GAGATAATAC AAATCCCATA
CTTGCAGAGG AACTAAAGAG AAAGATAATT CTCTACAATA GAAAGAAAGA ACTTAAGAGA
TTAAAGAAGA GATAG
|
|---|
| Protein sequence | MSLISDSKIN QILESSNIVD IIGEYVDLKR AGSSFKGLCP FHNEKTPSFT VDEKKQLFHC
FGCGAGGDVV SFIMQKEGLS YPESLKYLAD KAGISIDYTE NPGVNKKNKE LYDINKDIMM
FFYKNLLTDR KAQAYLKSRG LSSKIVNTFM LGYARDSWDD LYSYIRKKNY SEKDLDDLGL
IKKSSKGNYY DKYRDRIIFP IINHFGKVIG FGGRAVSGQM PKYLNSPESS IFKKRYNLYG
LNIYKRQKRK ELILVEGYMD VIALNNHGLD IAVASLGTAL TIDQAKLMKR YSDDIYICYD
QDNAGVKATE KAIEIFHEIG INPSVIVLDD GNDPDDFIKA KGKDAFEEKI ADAQDSYNYK
YNKILDEYSS AKPAERFDKL NLFVDFLASI KQELTQEIFI NNVSKLFDID KTTLKQAVSR
YNKDTDLKYS NKSKFNKKEK IIVESTNKDF RINELEVLRL FFNQRSDYEK DRDFFDRAIE
NEKINNVKTF LKEKDVSKFD LSDEDYKYIL DYIRDNTNPI LAEELKRKII LYNRKKELKR
LKKR
|
|---|
| |