Gene Apre_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1087 
Symbol 
ID8397874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1165223 
End bp1165717 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content38% 
IMG OID644995434 
ProductNADH dehydrogenase (ubiquinone) 24 kDa subunit 
Protein accessionYP_003152835 
Protein GI257066579 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.865762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT GTTATAAATT AGATAAAGAT AAGCTTGATG ACTTTACAAG CTATTTGGAT 
TCTATTAAGG ATGTTGATGG TTGTGTAATG CCAGCTCTTC AGAAGTGTCA AAACGTTTTC
TCATATATTC CAGAGCCTGT AGTAGATTTA ATGGCTCTTA AGTTAAATGT TCCATCCAGC
GAAATATACG GGGTGGCTAC ATTTTACTCA CATTTTTCTC TTAAACCTAA GGGAGAGCAT
GATATCTGCG TCTGTCTGGG TACGGCTTGC TATGTCAATG GCTCTGATAA GATTCTAAAA
TCTTTGGCAG AAGAGCTAGG GGTAGAAGTA GGCGATACGA CTGAAGATGG AAAGATTTCC
CTAAGTGAGG CAAGGTGTGT AGGTGAATGT GGATCTGCAC CAGTTGTTAT GATAGACGGA
GAAGATTTTG TAGAAAAGGT CGACCCATCT CAGGTTCACA ATATTATACA TAAAGTTAGA
AAGGCTGATT TATGA
 
Protein sequence
MSFCYKLDKD KLDDFTSYLD SIKDVDGCVM PALQKCQNVF SYIPEPVVDL MALKLNVPSS 
EIYGVATFYS HFSLKPKGEH DICVCLGTAC YVNGSDKILK SLAEELGVEV GDTTEDGKIS
LSEARCVGEC GSAPVVMIDG EDFVEKVDPS QVHNIIHKVR KADL