| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1086 |
|---|
| Symbol | |
|---|
| ID | 8397873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1163646 |
|---|
| End bp | 1165226 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644995433 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003152834 |
|---|
| Protein GI | 257066578 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA AAGAATTATT AGATCTCAAA GAAAAGTCTC TAGCAGAGCT TAGGGAAAAA
ATAGACTATA GCAAAATCTA TGAAGATGAT AAAGGTGATT TTAAGCTTAA GGGAGATTTC
TTTGAAAATC AAAAAAGACT AGTGCTTAAA AACTGTGGTA TAATCGATCC ATCATCAATC
GAAGATTACA TAGGATTGGA TGGATATAAG GCTCTTTATA AGGCTATTTT TGAATTAGAT
AGAAAAGAGA TAATTGATAT AGTAAAAGAT TCTGGTCTTA GGGGAAGAGG CGGAGCAGGT
TTTCCTACTG GAAGAAAATG GGAAGCGGCT TTCCTTCAAG ATACTGATAT TAAATACATA
ATATGCAATG CAGACGAAGG AGATCCCGGA GCTTTTATGG ATAGGTCAGT CCTTGAACTA
GACCCACACT CAGTACTCGA GGCTATGGCC ATATGTGCGA GGGCCATAGG TTCAAATAAA
GGATTTATAT ATGTTAGGGC TGAATATCCA AAGGCGGTTA GAGCTCTTGA AATAGCAATT
GATCAGGCTA AAAAATATAA TCTTTTAGGA GATAATATAT TAGGATCAGA TTTTTCTTTT
GATATAGAGC TAAGACTTGG AGCAGGTGCT TTTGTTTGTG GTGAGGGAAC TGCACTAATG
GAGTCAATAG AAGGAAGGCG AGGCATGCCT CGTAACAAGG AATACAGGAC GACTGTAAGA
GGGCTATGGG GTAAGCCTAC TGTAATAAAT AATGTAGAAA CTTTCGCCAA TATCGCCCAA
ATTATTAATA AGGGCTCAGC TTGGTTTAGG TCCTTTGGAA CAGAAAAATC TCCAGGTACT
AAAGTCTTCG CCCTATCCGG CAAGGTTAAA AATGCAGGTC TTGTCGAAGT GGAGATGGGA
ACTAGCATAG ATCAAATAGT TTATGATATA GGAAAAGGTA TTCAGAATGA TAAGGATGCT
AAAGCAGTAC AGACTGGAGG TCCTTCTGGA GGTTGTATAC CTAAAAGGCT CTTCGATACA
GCTTGTGATT TCGAATCACT GGGAGCTATA GGTTCCATAA TGGGATCAGG CGGCATGGTA
GTTATGGATG AGGATGACTG CATGGTTGAT GTTGCTAGGT TTTTCCTAGA ATTTTCTGTA
GACGAGTCAT GTGGTAAATG TACTCCTTGT AGAATTGGCA ATAAGAGATT ATTTGAAATG
CTCGATGATA TTACTAAAGG TAAAGCTAAT CATGAAACAC TCGATAAGCT AGAAGAATTA
TCAGAAATAG TATCCGAAGC TTCACTTTGC GGACTTGGCA AATCTAGTCC TAACCCGATT
ATTTCTACAA TGAGATATTT TTATGATGAA TATGAGGCCC ATGTAAATGA AAATAAAACT
TGTCCATCCA AAAGATGTAT TAGCCTTTTA AATTATACCA TAGGAGAAGA TTGTATAGGA
TGTGGTAAGT GTAAGAGACT ATGCCCTAAT GAGGCTATAG CTGGAGAAGC TCGCAAAAAA
CATGAAATAA ATCAAGACAA ATGTATTAAA TGTGGCCAGT GTAAAGATAA TTGCCCAATA
AATGCTATAG CTTTGGCCTA G
|
|---|
| Protein sequence | MNKKELLDLK EKSLAELREK IDYSKIYEDD KGDFKLKGDF FENQKRLVLK NCGIIDPSSI
EDYIGLDGYK ALYKAIFELD RKEIIDIVKD SGLRGRGGAG FPTGRKWEAA FLQDTDIKYI
ICNADEGDPG AFMDRSVLEL DPHSVLEAMA ICARAIGSNK GFIYVRAEYP KAVRALEIAI
DQAKKYNLLG DNILGSDFSF DIELRLGAGA FVCGEGTALM ESIEGRRGMP RNKEYRTTVR
GLWGKPTVIN NVETFANIAQ IINKGSAWFR SFGTEKSPGT KVFALSGKVK NAGLVEVEMG
TSIDQIVYDI GKGIQNDKDA KAVQTGGPSG GCIPKRLFDT ACDFESLGAI GSIMGSGGMV
VMDEDDCMVD VARFFLEFSV DESCGKCTPC RIGNKRLFEM LDDITKGKAN HETLDKLEEL
SEIVSEASLC GLGKSSPNPI ISTMRYFYDE YEAHVNENKT CPSKRCISLL NYTIGEDCIG
CGKCKRLCPN EAIAGEARKK HEINQDKCIK CGQCKDNCPI NAIALA
|
|---|
| |