Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0963 |
Symbol | |
ID | 8397749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 1029648 |
End bp | 1031396 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644995310 |
Product | Fibronectin-binding A domain protein |
Protein accession | YP_003152712 |
Protein GI | 257066456 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000189089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATG ATGGAATAGT TACACGTAAA ATAGTTAATG AGCTTAGAGA AAAATTATTG GGAGGAAAGA TTCAAAAAGT TACTCAACCT TCTAAAAACG ATATTGTATT TAATGTTTAT TCCATGGGTA AAAACTACAA ATTATTACTT AGTGCGAATA ATAATGAAGC TAGAATAAAT ATTACAAATA AAAAATATGA AAATCCAGAT GTCCCACCTA ATTTTTGTAT GGTACTAAGA AAGCATATAA ATCAAGGTAA AATCATAGAT ATAAGCCAAA GAGGACTAGA TAGAGTTGTT ATATTTTCAA TCTCTTCAAT AGACGAGATG GGCTTTGATA CATCTAAGAA GCTTATAGTA GAAATTATGG GGAAATATTC AAATATAATC TTAGTAGATG ATAATTACAA AATAATTGAT GCTATAAAAA AAGTAAATAG TCATATGTCA TCAGTTAGAG AAATATTTCC ATCACTTAAG TATGAATTTA TTGAAGATGA TAAAGAAGAT ATAATGAAGG ATGATTTCAA GTTAGATATT AAAACCCTAG ATCAGAGGCT TTCAGATGAG CAAGTTCCTT ACAAAATCTT CCATCAAAAT TATACAGGCT TTTCCCCTGC TGTAGGTAAA GAATTGGTTT TTAGGGCAGG AATTGATGAT AGAATTAACT GGGGACTTGT AAGCGAAGAT GAGAAAAGAA AATTAGATAA ACTTTTGGAC GAATTATCTT ATGATATAAG AAATAATAAT TTATCTAGTT TTGTGTACAA AGATAATATA AAAGTGAAAG ACTTTCACTG TATTAATTTT ACTCATTTAT CCTTTAATAA GGAAGAAAAT GAAACTATGA GTGAATCTGT AGAGGTATTT TTCACTACAA ACAAAACCCA TGATAGATTG AACCAAAAAA AATCCGATTT AAATAAAAAA CTAAATTCTA GTATCAAATC AGTTAAAAGG AAAGTCAAGA TTCTTAGTTC TAATTTGGAT AAGAAAGATT CCATAGATAA GTTTAAAAAA AGAGGAGATT TACTATCTGC TAATGTATAT AAGATTAATA AAGGAGACAA ATCAGTTAAG GTTTTAAATT ATTATAAGAA TAATCAAGAA ACAGTAATAA ATCTCGATCC ACAAAAAACT CCCTGGGAAA ATGTTGAGGC AAACTATACT AGGTCTAAAA AACTTAAAGC TTCCTATGAT TATGCCAAAA AGGACCTGCC AAAGCAAAAT GAACTACTAG CTTACCTTGA ACAAACTAAA GACTTTATAA ATAGGTCAAA TAGTATTGAA GATTTAACAG ATATTAGAGA AGAACTAGTG GAAATGAAAA TTATTAAGAA AAAAGCTAAG AATAAAAAGA AATCTTCCAA GAAATCAAAA CCATATCACT ATGTTACTAA AAACTCAAGC GATATATATG TAGGTAAAAA TAGTAAGCAA AATGATTATA TTACTCTAAA GCTTGCCAAC AAAGATGATT TTTGGTTTCA CATTAAGGAC CTTCCAGGAA GCCATGTTGT ATTAAGAAAT GACAATATAG ATGAAGATGA CATAAAGATA GCAGCTTATC TTGCCGCAAT AAATTCGTCA GTTTCTAGAG GTAATAAAGT AGATATAGAT TATACTCAAA AGAAGAATGT AAATAAAGCT AAGGGTGCAA AACCAGGAAT GGTATACTAT ACTGATTTCA ATACAATTAC AATTGATACA AGTATAGATT TAAAAGTTCA CTATAAAGAA GTTAAATAA
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Protein sequence | MSYDGIVTRK IVNELREKLL GGKIQKVTQP SKNDIVFNVY SMGKNYKLLL SANNNEARIN ITNKKYENPD VPPNFCMVLR KHINQGKIID ISQRGLDRVV IFSISSIDEM GFDTSKKLIV EIMGKYSNII LVDDNYKIID AIKKVNSHMS SVREIFPSLK YEFIEDDKED IMKDDFKLDI KTLDQRLSDE QVPYKIFHQN YTGFSPAVGK ELVFRAGIDD RINWGLVSED EKRKLDKLLD ELSYDIRNNN LSSFVYKDNI KVKDFHCINF THLSFNKEEN ETMSESVEVF FTTNKTHDRL NQKKSDLNKK LNSSIKSVKR KVKILSSNLD KKDSIDKFKK RGDLLSANVY KINKGDKSVK VLNYYKNNQE TVINLDPQKT PWENVEANYT RSKKLKASYD YAKKDLPKQN ELLAYLEQTK DFINRSNSIE DLTDIREELV EMKIIKKKAK NKKKSSKKSK PYHYVTKNSS DIYVGKNSKQ NDYITLKLAN KDDFWFHIKD LPGSHVVLRN DNIDEDDIKI AAYLAAINSS VSRGNKVDID YTQKKNVNKA KGAKPGMVYY TDFNTITIDT SIDLKVHYKE VK
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