Gene Apre_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0963 
Symbol 
ID8397749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1029648 
End bp1031396 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content28% 
IMG OID644995310 
ProductFibronectin-binding A domain protein 
Protein accessionYP_003152712 
Protein GI257066456 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000189089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG ATGGAATAGT TACACGTAAA ATAGTTAATG AGCTTAGAGA AAAATTATTG 
GGAGGAAAGA TTCAAAAAGT TACTCAACCT TCTAAAAACG ATATTGTATT TAATGTTTAT
TCCATGGGTA AAAACTACAA ATTATTACTT AGTGCGAATA ATAATGAAGC TAGAATAAAT
ATTACAAATA AAAAATATGA AAATCCAGAT GTCCCACCTA ATTTTTGTAT GGTACTAAGA
AAGCATATAA ATCAAGGTAA AATCATAGAT ATAAGCCAAA GAGGACTAGA TAGAGTTGTT
ATATTTTCAA TCTCTTCAAT AGACGAGATG GGCTTTGATA CATCTAAGAA GCTTATAGTA
GAAATTATGG GGAAATATTC AAATATAATC TTAGTAGATG ATAATTACAA AATAATTGAT
GCTATAAAAA AAGTAAATAG TCATATGTCA TCAGTTAGAG AAATATTTCC ATCACTTAAG
TATGAATTTA TTGAAGATGA TAAAGAAGAT ATAATGAAGG ATGATTTCAA GTTAGATATT
AAAACCCTAG ATCAGAGGCT TTCAGATGAG CAAGTTCCTT ACAAAATCTT CCATCAAAAT
TATACAGGCT TTTCCCCTGC TGTAGGTAAA GAATTGGTTT TTAGGGCAGG AATTGATGAT
AGAATTAACT GGGGACTTGT AAGCGAAGAT GAGAAAAGAA AATTAGATAA ACTTTTGGAC
GAATTATCTT ATGATATAAG AAATAATAAT TTATCTAGTT TTGTGTACAA AGATAATATA
AAAGTGAAAG ACTTTCACTG TATTAATTTT ACTCATTTAT CCTTTAATAA GGAAGAAAAT
GAAACTATGA GTGAATCTGT AGAGGTATTT TTCACTACAA ACAAAACCCA TGATAGATTG
AACCAAAAAA AATCCGATTT AAATAAAAAA CTAAATTCTA GTATCAAATC AGTTAAAAGG
AAAGTCAAGA TTCTTAGTTC TAATTTGGAT AAGAAAGATT CCATAGATAA GTTTAAAAAA
AGAGGAGATT TACTATCTGC TAATGTATAT AAGATTAATA AAGGAGACAA ATCAGTTAAG
GTTTTAAATT ATTATAAGAA TAATCAAGAA ACAGTAATAA ATCTCGATCC ACAAAAAACT
CCCTGGGAAA ATGTTGAGGC AAACTATACT AGGTCTAAAA AACTTAAAGC TTCCTATGAT
TATGCCAAAA AGGACCTGCC AAAGCAAAAT GAACTACTAG CTTACCTTGA ACAAACTAAA
GACTTTATAA ATAGGTCAAA TAGTATTGAA GATTTAACAG ATATTAGAGA AGAACTAGTG
GAAATGAAAA TTATTAAGAA AAAAGCTAAG AATAAAAAGA AATCTTCCAA GAAATCAAAA
CCATATCACT ATGTTACTAA AAACTCAAGC GATATATATG TAGGTAAAAA TAGTAAGCAA
AATGATTATA TTACTCTAAA GCTTGCCAAC AAAGATGATT TTTGGTTTCA CATTAAGGAC
CTTCCAGGAA GCCATGTTGT ATTAAGAAAT GACAATATAG ATGAAGATGA CATAAAGATA
GCAGCTTATC TTGCCGCAAT AAATTCGTCA GTTTCTAGAG GTAATAAAGT AGATATAGAT
TATACTCAAA AGAAGAATGT AAATAAAGCT AAGGGTGCAA AACCAGGAAT GGTATACTAT
ACTGATTTCA ATACAATTAC AATTGATACA AGTATAGATT TAAAAGTTCA CTATAAAGAA
GTTAAATAA
 
Protein sequence
MSYDGIVTRK IVNELREKLL GGKIQKVTQP SKNDIVFNVY SMGKNYKLLL SANNNEARIN 
ITNKKYENPD VPPNFCMVLR KHINQGKIID ISQRGLDRVV IFSISSIDEM GFDTSKKLIV
EIMGKYSNII LVDDNYKIID AIKKVNSHMS SVREIFPSLK YEFIEDDKED IMKDDFKLDI
KTLDQRLSDE QVPYKIFHQN YTGFSPAVGK ELVFRAGIDD RINWGLVSED EKRKLDKLLD
ELSYDIRNNN LSSFVYKDNI KVKDFHCINF THLSFNKEEN ETMSESVEVF FTTNKTHDRL
NQKKSDLNKK LNSSIKSVKR KVKILSSNLD KKDSIDKFKK RGDLLSANVY KINKGDKSVK
VLNYYKNNQE TVINLDPQKT PWENVEANYT RSKKLKASYD YAKKDLPKQN ELLAYLEQTK
DFINRSNSIE DLTDIREELV EMKIIKKKAK NKKKSSKKSK PYHYVTKNSS DIYVGKNSKQ
NDYITLKLAN KDDFWFHIKD LPGSHVVLRN DNIDEDDIKI AAYLAAINSS VSRGNKVDID
YTQKKNVNKA KGAKPGMVYY TDFNTITIDT SIDLKVHYKE VK