| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0952 |
|---|
| Symbol | xerC |
|---|
| ID | 8397738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1017263 |
|---|
| End bp | 1018252 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 644995299 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_003152701 |
|---|
| Protein GI | 257066445 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAA TTAATGAACC TATTATCATA ACAGACTATT TAAATTATTT AAAATCGATA
AGAGGCCTAT CCTCCAACAC GATCAAAGAG TATCAATATG ATCTTATGCT TATGATCAGA
TATATGATTA TAAGAAGAAT ATATTATGGT GATGAAGAGA GTTTTAATGA TGACTTCAAA
AATATAAAAA TTAATAGAAT TGTCAATCCT AAGTTTTTTG AATCTCTGAC ACTCCAGGAT
TTCTATGCTT TTCTTAGTTT TTTAGACAAC GAGAAGAATG ACTCTTCCAC CACTAGATCA
AGGAAAATAT CAGCTATAAA GTCCTTTTAT AAGTACTTAT TTTCTGAAAT AGAAGTAATT
GATTCAAATA TTAGCGACAA GCTTTCCAAC CCTAAAATAA GCCAAAGACA GCCTGTTTAT
TTAACCTTAA ATGAGACTGA GTTGTTGCTT GATACTATAA AAAATGAGCC TAACGAATTC
CTTAGATTTA GGGATCTAGC TATAGTATTT ACCTTCCTGA CTACAGGTAT GCGTTTATCG
GAACTTGTAA GTATAAATAT GGAAGATATA ATATACGACC ATTTTAATAT TATAGGTAAA
GGAAATAAAG AAAGAACCGT TTATTTGACT AATAATTGCA GAGAACTTCT CGATCAATAT
ATATTAATAA GAAATAAATA TATTAAAGAT TTAAAGATTG ATGCCCTATT TATCTCAACT
AGAAAGAAAA GAATTTCAAA TAGAGCAGTA CAGAGCACTA TAGATAAGTA TTTAAAAAAA
GCAGGATTTG ATACTTCTGT ATATTCTACC CATAAGTTAA GGCACACAGC TGCAACGCTC
ATGTATAAAT ATGGGAATGT TGACATAAGA GCTCTCAAGG ATATCTTAGG CCATGTAAAT
ATTTCTACCA CTCAGATATA TACTCATCTT GATGATGAAG ATCTTAAAAA CGCTGTAAAC
AAAAATCCAC TCTCAAATCT TAACATATAA
|
|---|
| Protein sequence | MKEINEPIII TDYLNYLKSI RGLSSNTIKE YQYDLMLMIR YMIIRRIYYG DEESFNDDFK
NIKINRIVNP KFFESLTLQD FYAFLSFLDN EKNDSSTTRS RKISAIKSFY KYLFSEIEVI
DSNISDKLSN PKISQRQPVY LTLNETELLL DTIKNEPNEF LRFRDLAIVF TFLTTGMRLS
ELVSINMEDI IYDHFNIIGK GNKERTVYLT NNCRELLDQY ILIRNKYIKD LKIDALFIST
RKKRISNRAV QSTIDKYLKK AGFDTSVYST HKLRHTAATL MYKYGNVDIR ALKDILGHVN
ISTTQIYTHL DDEDLKNAVN KNPLSNLNI
|
|---|
| |