Gene Apre_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0934 
Symbol 
ID8397720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp999214 
End bp999849 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content29% 
IMG OID644995281 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_003152683 
Protein GI257066427 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.800656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATG ATAAAAAAGA TAAAATCATT TACGGTTTAA TAATAGCAGT TTTTATCTTG 
ATAGCTAATT TCGCATATTC AAATAATATA GGTGGATTTT TTGACAAATC TGATAAAATT
TCATTAGTTG ATGAGGATAA TTTAACTGAT GAAGATAATA TTATTGACTC TAAAAAAGAT
GAAACAATAA ATGATACAAC AAAAAAAGTT TATATATCAG GCGAGATAAA CAAACCTGGA
GTATATCAAA TTAAAGATGG AGATAGACTT GAGGATTTGA TTGAGGAAGC TGGTGGATTG
ACAGATAAGG CAAGTGAAAA AACACTTAAT CTTGCTCAAA GATTAGATGA TCAAATGAAA
ATTTACATAC CTAATATCAA TGAAGAGAAC TCATTAGAAA ATATTGATCC TAATCAGGCT
GCAAATATAA GTGTTAGTAG CAAATCTGAA CTTATTAATA TTAATACCGC CAGTAAAGAA
GAACTTATGA CCTTACCTAA CATAGGAGAT AAGAGGGCGG AAGCTATAAT CGAGTATAGA
AGTGCAAATA AGTTTGAGAA TATAGAAGAT ATTAAGAATG TTACTGGAAT AGGCGATAAA
TTTTATGAAG CCTTAAAGGA TTTGATTACA ATATAG
 
Protein sequence
MSDDKKDKII YGLIIAVFIL IANFAYSNNI GGFFDKSDKI SLVDEDNLTD EDNIIDSKKD 
ETINDTTKKV YISGEINKPG VYQIKDGDRL EDLIEEAGGL TDKASEKTLN LAQRLDDQMK
IYIPNINEEN SLENIDPNQA ANISVSSKSE LININTASKE ELMTLPNIGD KRAEAIIEYR
SANKFENIED IKNVTGIGDK FYEALKDLIT I