Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0934 |
Symbol | |
ID | 8397720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 999214 |
End bp | 999849 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 644995281 |
Product | competence protein ComEA helix-hairpin-helix repeat protein |
Protein accession | YP_003152683 |
Protein GI | 257066427 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.800656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATG ATAAAAAAGA TAAAATCATT TACGGTTTAA TAATAGCAGT TTTTATCTTG ATAGCTAATT TCGCATATTC AAATAATATA GGTGGATTTT TTGACAAATC TGATAAAATT TCATTAGTTG ATGAGGATAA TTTAACTGAT GAAGATAATA TTATTGACTC TAAAAAAGAT GAAACAATAA ATGATACAAC AAAAAAAGTT TATATATCAG GCGAGATAAA CAAACCTGGA GTATATCAAA TTAAAGATGG AGATAGACTT GAGGATTTGA TTGAGGAAGC TGGTGGATTG ACAGATAAGG CAAGTGAAAA AACACTTAAT CTTGCTCAAA GATTAGATGA TCAAATGAAA ATTTACATAC CTAATATCAA TGAAGAGAAC TCATTAGAAA ATATTGATCC TAATCAGGCT GCAAATATAA GTGTTAGTAG CAAATCTGAA CTTATTAATA TTAATACCGC CAGTAAAGAA GAACTTATGA CCTTACCTAA CATAGGAGAT AAGAGGGCGG AAGCTATAAT CGAGTATAGA AGTGCAAATA AGTTTGAGAA TATAGAAGAT ATTAAGAATG TTACTGGAAT AGGCGATAAA TTTTATGAAG CCTTAAAGGA TTTGATTACA ATATAG
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Protein sequence | MSDDKKDKII YGLIIAVFIL IANFAYSNNI GGFFDKSDKI SLVDEDNLTD EDNIIDSKKD ETINDTTKKV YISGEINKPG VYQIKDGDRL EDLIEEAGGL TDKASEKTLN LAQRLDDQMK IYIPNINEEN SLENIDPNQA ANISVSSKSE LININTASKE ELMTLPNIGD KRAEAIIEYR SANKFENIED IKNVTGIGDK FYEALKDLIT I
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