Gene Apre_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0921 
Symbol 
ID8397707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp990732 
End bp991169 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content28% 
IMG OID644995268 
Productlipoprotein signal peptidase 
Protein accessionYP_003152670 
Protein GI257066414 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000390697 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATATT TAGTAATTAT AATATTGGGT CTTGTAATTG ATAGGCTCAC AAAAATTTAT 
GCAGTTAACA ACTTAATGGG AAAAAATATT GATGGAAAGG TCTTTAATTT AACCTACCTT 
GAAAATAGAG GAGCGGCTTT TGGAATCTTA CAAGATAAGA GATTGATATT TATTATACTT 
ACAACTGCAA TTGTTATATA TTTGCTTTAT TATTTTATTA AAAATATAAA GACAAGCCCT 
ATGATCCTCA ATTTATCGCT AGCGATGATT ATATCTGGAG CTATAGGTAA CTTCTATGAT 
AGGCTTATCC AAGGATATGT AGTAGATTTT TTAGAGTTTT CTTTTGTACA ATTTCCAGTA 
TTTAATGTTG CAGATATTTT GGTAACAGCA GGATGCGCTC TAATGATTAT TTATATTCTC 
TTACATGGAG ATAAATAA
 
Protein sequence
MIYLVIIILG LVIDRLTKIY AVNNLMGKNI DGKVFNLTYL ENRGAAFGIL QDKRLIFIIL 
TTAIVIYLLY YFIKNIKTSP MILNLSLAMI ISGAIGNFYD RLIQGYVVDF LEFSFVQFPV 
FNVADILVTA GCALMIIYIL LHGDK