| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0910 |
|---|
| Symbol | |
|---|
| ID | 8397696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 979756 |
|---|
| End bp | 981936 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644995257 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_003152659 |
|---|
| Protein GI | 257066403 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.746196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG ATTTTAATAA AGAATATGAA TTATTTGAGG ATGATATAAA GAAAAATAAT
CCGAATGCTG ATGTAAATCT AATCAAAAAA GCCTACGATT TTGGTGAATT TCACCACAGA
GGTCAAAAGA GAAATTCTGG TGAAGATTAT TTTATTCATC CAATAGCTGT TGCTAGGAAG
TTATCTGATA TGAAGCTTGA TGATGAGACA ATTTGTGCTG GACTAATGCA TGATGTCTTA
GAGGATACTC CAGTAACAAG GGAAGAAATG GCTGAAGAAT TTGGCGAAGA GATAACCTTT
CTCGTTGATG GTGTAACAAA ACTAAAGAAT TTGAATTATA CCTCACGAGA AGAAAAACAA
GCCGATAATA TCAGAAAAAT GGTCATGGCC ATGTCAAATG ATGTTAGAGT TGTGCTGATA
AAACTATCAG ATAGGCTCCA CAACATGAGG ACACTTGAGT ATATGACTAG AAAAAAACAA
ATTCAAATAG CCGATGAGAC TTTAGAAATA TATGTCCCAC TTGCCCATAG ACTAGGAATA
TACTCGCTTA AGTGGGAGCT TGAGGATTTA TGTTTTAGAT ACCAAGAACC TGAAAAATAC
TATGAACTCG CTGAGATGGT AAATGTTAAA AGACGAGAGA GAGAAGCCTA TATTAATGAA
ATAATTAATA CCTTGACTAA CTCTCTTAAA GGAACTAGCA TAAATTTCGA GATTTCTGGT
AGACCTAAAT CTTTATATTC TATAAACAAG AAGATGGAAA GAAATGGTAT AGCCTTTGAT
GAGATCTACG ACTTGACTGC CATTAGGGTA ATTGTAGATA CAATTGCAGA ATGTTATGCC
GTTTTAGGTA AGGTCCACTC CCTATGGAGG CCAATTCCAA ATAGGATTAA AGATTACGTT
GGCCAGCCTA AACCAAACGG TTATAGATCA CTTCATACAA CAGTTTTTGG CGAAGATTCT
AAGCCATTTG AAGTTCAAAT CAGAACAAGA CAGATGCACA AGGAATGTGA GTATGGAGTT
GCTGCCCACT GGAGATATAA GGAAAATAAC AACACCAAAT CTGACTTTGA TGATGCCATG
AGTTTTCTAA GAAGAATTGT TGAATGGCAA CAAGAAGGTG GGAAAGACGT AAATAACAAA
GAATTTATGG ATACATTGAA AAATGATTTC TTCTCAAGAG AAATTTACGT CTATTCACCA
AGAGGTGAGG TATATTCTCT ACCTATGGAT GCTTGTTCTA TAGACTTTGC TTATAAAATC
CATACAGAAG TTGGAAATAG TTGTGTGGGA GCTAAGGTTA ATGGAAGGAT GGTTCCTCTA
ACACATAAGC TTAAAACTGG GGATTTAGTA GAAATTATAA CTAGCAAAAA TTCCCATGGT
CCATCTAGAG ACTGGCTTAA CATTGTAAAA AGTAACCAAG CTAAAAACAA GATAAAGCAA
TTCTTCAAGA GAAATGACAA AGAAGAAAAT ATAGAAATTG GTAAAAATTC TGTAATCAAG
GAAATCAAAA AATATAGGCA AGGCTACAAA TCTCTTTTAA GAGAAGAATG GCTTGAGAAA
ATTGCAAGTG ATTTGGGCTA TCCTGGAGAA GATGAAATGT ATGCATCCGT TGGTTATGGA
AAGACAAATG TAGAACAAAT CACACAAAAA CTTATCAAAT TTGAAGTTGA TGAGAAAAAG
GAAGAAGAAG CTAAAAAGCC AATTGATTAT AGCAAGGGAG AAATAAAAAA TACTGGATCT
GGAGAAATTA GAGTAAGCGA TTTAGACGAA AATGTCGAAG TCAAACTTGC AAAATGTTGT
ACACCAGTCC CTGGAGATCC AATTATAGGT TTTATAACAA AGGGAAACGG GATATCTGTT
CATGTAAAAA CTTGTCCAAA TATTATAAAC TTGAAATCTC CTGAAAGGCT TATAGATGTC
TATTGGCAAA ACACAAAGGA AGATAAATTC CCTGTTAAAA TTCAGCTTTT AACTTCAAAT
TCTCCTTCTA TACTCTTTGA GATAACCAAG CTTATGTCAA CAGTAAACGT TAATATATTG
GCTATAAATG CAAGAACTGA TAAGGACGAA GGAACAATAG ACTTACTGAT TGAAGTAAAT
AATATGGACC AATTATCAGA TGTAATTACT AAGTTAAAAT CTATTAAAAC TGTGGAGAAT
GTATATAGGA TAAAGAATTA A
|
|---|
| Protein sequence | MATDFNKEYE LFEDDIKKNN PNADVNLIKK AYDFGEFHHR GQKRNSGEDY FIHPIAVARK
LSDMKLDDET ICAGLMHDVL EDTPVTREEM AEEFGEEITF LVDGVTKLKN LNYTSREEKQ
ADNIRKMVMA MSNDVRVVLI KLSDRLHNMR TLEYMTRKKQ IQIADETLEI YVPLAHRLGI
YSLKWELEDL CFRYQEPEKY YELAEMVNVK RREREAYINE IINTLTNSLK GTSINFEISG
RPKSLYSINK KMERNGIAFD EIYDLTAIRV IVDTIAECYA VLGKVHSLWR PIPNRIKDYV
GQPKPNGYRS LHTTVFGEDS KPFEVQIRTR QMHKECEYGV AAHWRYKENN NTKSDFDDAM
SFLRRIVEWQ QEGGKDVNNK EFMDTLKNDF FSREIYVYSP RGEVYSLPMD ACSIDFAYKI
HTEVGNSCVG AKVNGRMVPL THKLKTGDLV EIITSKNSHG PSRDWLNIVK SNQAKNKIKQ
FFKRNDKEEN IEIGKNSVIK EIKKYRQGYK SLLREEWLEK IASDLGYPGE DEMYASVGYG
KTNVEQITQK LIKFEVDEKK EEEAKKPIDY SKGEIKNTGS GEIRVSDLDE NVEVKLAKCC
TPVPGDPIIG FITKGNGISV HVKTCPNIIN LKSPERLIDV YWQNTKEDKF PVKIQLLTSN
SPSILFEITK LMSTVNVNIL AINARTDKDE GTIDLLIEVN NMDQLSDVIT KLKSIKTVEN
VYRIKN
|
|---|
| |