Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0893 |
Symbol | |
ID | 8397679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 964744 |
End bp | 965700 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 644995240 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003152642 |
Protein GI | 257066386 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAG TTAGAATAAG TGAGAATGAC GGAAATCAGA GATTTGATAG GTTTTTGAGG AAGTATTTCG AAAATGCTCC TCTGTCAGTT ATTCAAAAAA ATATTAGAAA GAAAAATTTT AAAATCAATG ATAAGAGAGC AAAAAAAGAT GATTTTGTAT ATCCTAATGA CATAGTTAAG ATGTATATAA AAGATGAGGA TTATGATAAA TGGATTACAA AAATCGACTA TAAACCTAGT GATTTCGATC TTGATATAGT CTATGAGGAT AATAATATAA TAATTATGGA CAAAAAGTCA GGTCTCTTAA CTCATAGCTC TTCTAAAAAA GATTATGGCA ATAATCTAGT AGATAATATG CTACATTATT TGTATAAGAC TAAATCTTTT GACATGTCAG ATAGAACTTT CAAGCCAGCT GTAGTTAATA GACTAGATAG AAATACAGCA GGCCTTGTTA TAGGAGCAAA AAATGCTGAG AGCCTTAGGA GTCTGAACAA GGCAATTAGG GAAAATAAGA TTGATAAGTT TTATCTAACA ATTGTAAAAG GTTATGTGGA AAAGGAATTT TCAATAGATA CTCATATAAG TAAAAACGAT AATCGTAATC GTGTCAGTAA ATCGAGGAAT GGAAAGAGAA TTAAAACTAA TTTTAAGCCG TTAGAAACAA ATAAAAAGTT TAGTTTACTT GAGTGTGAAT TAATTACTGG CAAAACTCAC CAGATAAGAT TTTCGTTAAA AGAAAATTCC ACACCTATAA TTGGTGATAG AAAATATGGC GATAGAAATA CAAATCAGAA GCTAAGAAAA TTTGGAATAA ATAATCAAAT TCTTTTGGCC TATAAGATTA GATTTTCAAA CATAGAAGGA TTGGAATATT TGGAAGGTAA AGAATTCTAT TCTGAAAGAA AAGAATCTAT TTTAAAATTA AAGGATAAAA TATTTAAGGA GTTATAA
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Protein sequence | MKEVRISEND GNQRFDRFLR KYFENAPLSV IQKNIRKKNF KINDKRAKKD DFVYPNDIVK MYIKDEDYDK WITKIDYKPS DFDLDIVYED NNIIIMDKKS GLLTHSSSKK DYGNNLVDNM LHYLYKTKSF DMSDRTFKPA VVNRLDRNTA GLVIGAKNAE SLRSLNKAIR ENKIDKFYLT IVKGYVEKEF SIDTHISKND NRNRVSKSRN GKRIKTNFKP LETNKKFSLL ECELITGKTH QIRFSLKENS TPIIGDRKYG DRNTNQKLRK FGINNQILLA YKIRFSNIEG LEYLEGKEFY SERKESILKL KDKIFKEL
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