Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0770 |
Symbol | |
ID | 8397552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 869804 |
End bp | 871930 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644995115 |
Product | ribonuclease R |
Protein accession | YP_003152519 |
Protein GI | 257066263 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.246847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAA AAGATATAAT ATTAAATATA GTATATGATG AAAATTATCT GCCAATGACA TTTAAGGAAT TAGATAAGTA TCTTAAGGTG GACAAATATA CTAGAAAGGC TGTTAGAGAT ATCATAAAAG ACTTGGAGAA AGAAAATAAA ATTCGAGTTT CCAATAAAAA GAGAATTATG CCTCTAACAG ATGATGAGAT TAATCTAATT GGTAAAATAT CCATGGCTCA AGCTGGGTAT GGATTTTTTA TTTCCGATAA TAGAGATTTC GAAGATGTTT TTATAAAAAG AGACAATATG AATAAGGCCC ACAATAATGA TAGGGTCAAA ATCGAGCTTA TTAAGAGAAA AGAGAAGGGA AGAAAGGCCG AGGGAAGAGT AATAGAAATT ATTGAAAGAG CTAAAGATGA AATAGTTGGA AGCTTTCAAA AAAATAAGGG CTTTGGCTTT GTAATTCCAG ACGATAGAAG TTACGGTGAA GATATATTTA TAGCTGAAAA GTTCTTTAAT AAGGCAAAAA ATAAGGATAA GGTAGTTGTT GAGATTATAA ATTATCCAAA AGACGGTAAA CCTGAAGGAA GAATTAAGGA AATTATCGGC GGTAAGAACG ATAAGAATAT TGAAATCCTA TCTCTCATCA GGGCCCACGG CCTTCCTTAC CAATTCTCAA AGGAGACTAA GAAGGAAAGT CTTTACGTAA AGGATACGGT TAATGAAATA GAACTTGAAG GAAGGAAGGA CTTAAGAGAT CTCTTCACAG TTACGATTGA TGGTAGAGAT TCCAAGGACT TTGATGATGC TATTTCTATA GAGAAAAATG GAGAAAACTA TGACTTGTAT GTTCATATTG CAGACGTTGC CCACTATGTT AAAAAAGGAA CTGCCATCGA TAATGACGCC TATGAGAGGG GAAACTCTAC TTATCTATTT AATATCGTAA TTCCCATGCT ACCAGAGGTC CTATCAAATG GGATCTGCTC TCTAAATCCC AATGAGGATA GGCTTGCCAT AAGCTTAAAG ATGACAATCA ATGATAAGGG CAAGGTTATA GATAATGAGT TTTATGAGTC AGTTATTAAT TCTGATCATA GATTGGTGTA TGACGATGTA AATGCATTTT TGGATAAGAA TGATGAGAAT GTATATGAAG ATGAGCTTAT AAAAGAAAAG TTAAGGATTT TTGATGAGCT TAGGGAAATC CTAAATACTA TGAGAGAAAA AAGAGGATCA ATCGACTTTA ATTTCTCTGA AAGTCAGATA GATGTAGCTG AGGATGGAAG AGTTTTAAAT ATATCAAACT TTGAAAGAGG ATCGGGCAAT AAGATGATTG AAGAATTCAT GCTTGCCGCT AATGAAACAG TTGCAAGTCT TTTTGCCTAT ATGGACTTTC CTTTTATATA CAGAATCCAC GAAAAACCTA AAGAAGAAAA GATCGAAAGC TTTAAGAAAG CTCTTAACAC TATGGGATAT AATATAAGGG GAAATGACCT ACATCCTAAG GACTTCCAAC AAATTCTAGA AGAAGTGGAA GGTAAGGACG TTGAATCAGT AATTAATATC TTGATGCTAA GGACCATGCA GAAGGCCAAG TATTCCGAGC ATAGGGATAT GCACTTTGGT CTATCTACAT CCTTCTACAC CCATTTTACG TCCCCAATTA GAAGATACCC TGACCTAATA GTTCATAGAT TAGTCAAAAA ATTCATTCAT AACAAGCTAA CTAGTCTTAA TCAGACAAGT CTTGAAAAAA CAATCACAAA TAATGCAGAC CACCTTTCTA TGACAGAAAG AAGAAGCGAA GATTGTGAGA GAGATGTGGA AGATTTACTT AAATGTAAGT ATATGACTCG TTTTATTGGC GATGAATTCT ATGGAAATAT ATCTGCAATA ACTGAATTTG GCATATTTAT TGAATTAGAT AATACTGTAG AAGGACTTTT CATGTACAAG TTTTCTAATG ATAGATACGA GTATCTAGAA GATAAGATGA AAGCCTTTAA TACAGATAAA AAAATCTTCT ATTCGATTGG AGATAGGGTT AAGATTAGGG TGATGGATGT AGACACATAT CAGAGAAATA TCGACTTTGA TTTGGAGGTA AACGATGAAA TTATTAGCCA ACAATAA
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Protein sequence | MNLKDIILNI VYDENYLPMT FKELDKYLKV DKYTRKAVRD IIKDLEKENK IRVSNKKRIM PLTDDEINLI GKISMAQAGY GFFISDNRDF EDVFIKRDNM NKAHNNDRVK IELIKRKEKG RKAEGRVIEI IERAKDEIVG SFQKNKGFGF VIPDDRSYGE DIFIAEKFFN KAKNKDKVVV EIINYPKDGK PEGRIKEIIG GKNDKNIEIL SLIRAHGLPY QFSKETKKES LYVKDTVNEI ELEGRKDLRD LFTVTIDGRD SKDFDDAISI EKNGENYDLY VHIADVAHYV KKGTAIDNDA YERGNSTYLF NIVIPMLPEV LSNGICSLNP NEDRLAISLK MTINDKGKVI DNEFYESVIN SDHRLVYDDV NAFLDKNDEN VYEDELIKEK LRIFDELREI LNTMREKRGS IDFNFSESQI DVAEDGRVLN ISNFERGSGN KMIEEFMLAA NETVASLFAY MDFPFIYRIH EKPKEEKIES FKKALNTMGY NIRGNDLHPK DFQQILEEVE GKDVESVINI LMLRTMQKAK YSEHRDMHFG LSTSFYTHFT SPIRRYPDLI VHRLVKKFIH NKLTSLNQTS LEKTITNNAD HLSMTERRSE DCERDVEDLL KCKYMTRFIG DEFYGNISAI TEFGIFIELD NTVEGLFMYK FSNDRYEYLE DKMKAFNTDK KIFYSIGDRV KIRVMDVDTY QRNIDFDLEV NDEIISQQ
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