| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0703 |
|---|
| Symbol | |
|---|
| ID | 8397484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 802265 |
|---|
| End bp | 803143 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644995053 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_003152458 |
|---|
| Protein GI | 257066202 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000520849 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT TTAGAAATTA TTCTTTTATA ATAGTTGCTC TAGGCACAGT AATCCTTGCT
ATGGCAACAG GTATAATCGG GTCTATAAGT GTTTTAAAAG GAAAATCGCT AATTGGTGAT
GCTATAGGTC ATTCTACCTA TCCAGGCATA GTCCTTGCCT TTATGTTATC AATGGAAAAA
TCTCCTCTTA TACTTTTGTT AGGAGCAGCC ATCGCTGGGG CTATATCTTT TTTCTTGATA
GATATAATCG CAAATAATTC AAAGATAGAC CTTGATGCGA CTTTAGCTAT TGTGCTGTCA
AGTTTTTTTG GTCTTGGTAT GGTTTTAAAA TCATTTATCC AAGGCAATCC CATCTACGCA
GGAGTTTCTC AATCGGGTCT AAAAAATTAT ATTTTTGGCC AAGCTTCATA CATCATGAAA
AATGATGTAA AGATAATATT CGTTGTATCT ATTTTTTCAC TTTTACTTCT TTTAGCTTTC
TATAAGGAGA TAAAAGTTTA TGTATTTGAT GAAGTTTATG CTAAAACAAT CGGTATTAAT
CCTACTTTGA TGAATACAGT AATTCTTCTT GCGACCATGC TTTTAATCAC AACTGGTCTT
AAGTTGGTTG GCGCGATTTT AATTTCATCA ATGCTTATAG TGCCTGCAAT AACAGCCCTA
CAGTGGACTG ATAAATTTCA TGAAATGTTA ATAATAGCAG GGTTTTGTGG AGGCGTTTCT
GCATTTATTG GAACCTATAT ATCCACAGTT TACGATGGTA TGAGTACAGG ATCTACAATC
ATACTTATCA TGAGCTTTAT TTCACTAATT TCTATGATAA TCGGCCCAAG AGGTATGAGG
ACAAAGATTG TGAGGAAAAA ATATGATGGA CTTTCTTAG
|
|---|
| Protein sequence | MEIFRNYSFI IVALGTVILA MATGIIGSIS VLKGKSLIGD AIGHSTYPGI VLAFMLSMEK
SPLILLLGAA IAGAISFFLI DIIANNSKID LDATLAIVLS SFFGLGMVLK SFIQGNPIYA
GVSQSGLKNY IFGQASYIMK NDVKIIFVVS IFSLLLLLAF YKEIKVYVFD EVYAKTIGIN
PTLMNTVILL ATMLLITTGL KLVGAILISS MLIVPAITAL QWTDKFHEML IIAGFCGGVS
AFIGTYISTV YDGMSTGSTI ILIMSFISLI SMIIGPRGMR TKIVRKKYDG LS
|
|---|
| |