| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0702 |
|---|
| Symbol | |
|---|
| ID | 8397483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 801550 |
|---|
| End bp | 802260 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644995052 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003152457 |
|---|
| Protein GI | 257066201 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000834751 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGATG TAATCATAAA AGTTGAAGAT ATGACAATAG CATATGCAGA TAAGCCTGTG
CTTTGGGATA ATGATATTGA AATAATTAAT AATTCGATAA CGGCTATAAT TGGTCCTAAT
GGAGCGGGAA AATCTACCTT AATCAAGGGA ATCCTAAATT TGCAGAAAAA ATTGTCTGGG
TCTGTATTAA TTATGGGCAA GTCCTTTGAT GAGGTTAAGA AAAAAATTGC CTATATTCCT
CAAACAGCTT CTGTTAATTG GGATTTTCCA ACAACGGTCC TAGACGTTGT CCTAATGGGT
AGGTATGTCC ACCTTGGTTG GCTCAAAAGG CCAACTAAGG CTGATTATGA CCTTGCAAGA
AAGGCCCTAG AAAAAATTGG TATGCAAGAT TTTGAAGATA GGCAAATTTC AGAGCTTTCT
GGGGGTCAGA GACAAAGAGT TTTTATAGCA AGAGCTATAG CTCAAGATGC TGACATTTAT
TTTATGGATG AGCCCTTGGC TGGTGTTGAT AAGGTGACAG AAAAAGTTAT CTTTAATTTT
ATGAAAGATT CTCAAATGAA GGGAAAAACT TCCATAGTTG TTCACCATGA TCTTAACACT
ATAGAAAAGT ATTTTGATCA TATAGTGATT TTGAATAAAA AAGTAATTGC CCAAGGACCT
GTTAGCGAGG CTTTCACAAA AGAAAATGTA GATAAGGCCT TTGTGAGGTA A
|
|---|
| Protein sequence | MKDVIIKVED MTIAYADKPV LWDNDIEIIN NSITAIIGPN GAGKSTLIKG ILNLQKKLSG
SVLIMGKSFD EVKKKIAYIP QTASVNWDFP TTVLDVVLMG RYVHLGWLKR PTKADYDLAR
KALEKIGMQD FEDRQISELS GGQRQRVFIA RAIAQDADIY FMDEPLAGVD KVTEKVIFNF
MKDSQMKGKT SIVVHHDLNT IEKYFDHIVI LNKKVIAQGP VSEAFTKENV DKAFVR
|
|---|
| |