Gene Apre_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0620 
Symbol 
ID8397400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp721754 
End bp721999 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content37% 
IMG OID644994977 
ProductRNA-binding S4 domain protein 
Protein accessionYP_003152383 
Protein GI257066127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.215008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAG ATAAATTTTT AAAAAATGCG AGAGTTATTA AAAGAAGACA AGTTGCTAAA 
GAGGCTTGTG AAAATGGCAG GGTTAAGATA AATGAAAAAG AAGCCAAGCC AGGAAGCCTT
GTAGAAGAAG GAGACATAGT AGAAGTCGCC TTTGGCAAGA GCAATCTTAA ATTTAGGGTC
CTAAACTTGA TTGACGGAGC CAAGAAGAAC GATGCTTTTT CTATGTATGA GGTTATCGAT
GAGTAA
 
Protein sequence
MRIDKFLKNA RVIKRRQVAK EACENGRVKI NEKEAKPGSL VEEGDIVEVA FGKSNLKFRV 
LNLIDGAKKN DAFSMYEVID E