Gene Apre_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0605 
Symbol 
ID8397385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp704718 
End bp706172 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content39% 
IMG OID644994962 
Productcarbon starvation protein CstA 
Protein accessionYP_003152368 
Protein GI257066112 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000190307 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAT TTATTATCGG TCTTATAATA TTGATCGCCG GCGGTTTCGT CTATTCTAAA 
TACGTTGAAA AACAACTTGA ACCCGACGAT CGTGAGACTC CAGCTGTTAG AAAGTCTGAC
GGAGTCGACT TTGTTGCTAT GAGCGAGAAG AAAAACTGGC TTATAAACCT ACTAAACATC
GCAGGAACTG GCCCAATCTT AGGCCCTATC CAAGGTATCC TTTTCGGACC AATTGCATTT
ATCGCAATTC CAATTGGCTG TGTTTTTGCA GGTGCAGTTC ACGATTTTTG TACAGGATTT
ATCTCAATGA GAAACGGCGG AAGCCAAGTT CCAAAGCTTG TTGGTAAATA CATAGGTGAA
GGATGTAGGA AATTCTACAA TATTGTTATT GCAATCCTTC TTCTCCTAAC TGGTGTTGTA
TTTGTTTATA CACCTGGAGA CTTAATTGCC AATGATATTA TGGGTGCAGA TCCAAACTCA
AATGTAATCT GGGTAATTTA TGCAGTAATC TTCGCATATT ATATCCTTTC AACAGTTCTA
CCAATAGATA AGCTAATCGG AAGAATCTAT CCAATATTTG GTGCCTTCCT TATTATCTCT
GCAATTGGTG TCCTTATAGG AATTATACTT AAGGGAAATG CTGACCTTTC ATTTAAGGGT
CAAGGCCTAT TAGCTAAGCA TCCACTCGGA CAAAGATTTA TCCCATCATT CTTTATCACA
GTTGCATGTG GTATACTTTC AGGCTTCCAC GGTTCCCAAG TTACTCTAGT TTCAAGAACA
GTTAGAAGTG AAAAAGAAGC AAAGACAACC TTCTACTCTA CAATGATTGC AGAAGGAATT
ATCGCCATGA TTTGGGCTGC AGGTGCTATG GTAATTTTCT CCACAGGAAC AGCTGCCCTA
GACACACCAG GTACCCTTAT GGTTGGTGAA ATCTCAAGAT ACTTCATGGG TAATGTCGGA
GGACTTATCG CTGTAATCGG TGTTATAGCA CTTCCTATCA CATCTGGTGA TACAGCCTTT
AGGTCCCTTA GATTAATCGT AGCTGAAGAA CTCAATATAG ACCAAAAAGT AGCTGGTAAG
CGTGCTGGCC TTGCAGCCTG TCTATTCGTT CCAGCAGCAG CTATTCTTTA CTTTGCTAAA
TCTAACCCTA AAGGATTCAA CATTCTTTGG AGATACTTCG GATTTACAAA CCAATTTGTG
GCAATCTTTG CCCTAGCTGT AGCTACAAGC TATCTAATCT ATAACAATAA GAACTACCTA
ATAACATTGA TTCCAGGAAT CTTCTATACT TTCATAGTGT TTGCCTTTAT AATCAACGTC
AAAGGACTCG GTTTCGGTCA AGACTTTAAG ATTGCTTATC CTATAGCAGG TATCCTTGCT
ATAGCTTATG CAGTATTCGT TGTAAAGGTA TCTAAGAAAA ATAGAAGAAG AATTGAAGCA
ATTAAGTTAG ACTAA
 
Protein sequence
MLLFIIGLII LIAGGFVYSK YVEKQLEPDD RETPAVRKSD GVDFVAMSEK KNWLINLLNI 
AGTGPILGPI QGILFGPIAF IAIPIGCVFA GAVHDFCTGF ISMRNGGSQV PKLVGKYIGE
GCRKFYNIVI AILLLLTGVV FVYTPGDLIA NDIMGADPNS NVIWVIYAVI FAYYILSTVL
PIDKLIGRIY PIFGAFLIIS AIGVLIGIIL KGNADLSFKG QGLLAKHPLG QRFIPSFFIT
VACGILSGFH GSQVTLVSRT VRSEKEAKTT FYSTMIAEGI IAMIWAAGAM VIFSTGTAAL
DTPGTLMVGE ISRYFMGNVG GLIAVIGVIA LPITSGDTAF RSLRLIVAEE LNIDQKVAGK
RAGLAACLFV PAAAILYFAK SNPKGFNILW RYFGFTNQFV AIFALAVATS YLIYNNKNYL
ITLIPGIFYT FIVFAFIINV KGLGFGQDFK IAYPIAGILA IAYAVFVVKV SKKNRRRIEA
IKLD