Gene Apre_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0583 
Symbol 
ID8397363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp684191 
End bp685108 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content39% 
IMG OID644994942 
Productpseudouridine synthase, RluA family 
Protein accessionYP_003152348 
Protein GI257066092 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATGA TTGCAGATGA AATAATAAGA ATTGATAAGT TTATATCTGA TGAGCTCGAG 
GAGATCCCTC GTGAGAAGAT TAAGGACTTC ATCAAGGATA AGAAAATAAA AGTGAATAAT
TCTTTCGTTA AGCCTAGTTT TAAGCTAAGC GAGGGAGATG AGATAGAAAT CGACGACTCT
CTTTTCCATG TGCCAGAACT TAAGGCAGAA GATATGGAAC TAAAGATTGT TTATGAGAAT
GATGATTACG CCATTATCGA TAAGGATAGT AATGTCATAG TTCACCCAGC AGGGAAAATC
ATTACAGGAA CCCTGGTAAA TGGTCTTCTT GGTAGATACG GTTATGATGG ACTTTCTCAC
ATAGGAGGTG ACGATAGGCC AGGCATTGTC CACAGGCTTG ATAAGGATAC GACAGGACTA
ATAGCCATAA CGAAAACTAA CGAAGCCTAT AAGTATTTCA AGAAGATGTT CGAGACAAGA
AAGGTCGATA AATACTATTA CGCCATAGTC TTCGGTAACT TCGATAAGAA AAAGGGAACC
ATCGATAATT TCATGGATAG GGATGTCCAC AACAGGAGGA AGATGGCTGT AAGAAATACT
GGAAGAAGGG CAGTAAGCCA CTATGAGGTC ATAAGCGAGG TAGAGGGTTT TTCTCTTGTA
AGGATAAAGA TAGAAACAGG AAGGACCCAT CAGATTAGAG TCCACATGAC CCATATCAAT
CACCCTATCT TGGGAGATCC TGTTTATGGC AATGTCAAGC ACAAATTTAA TCTCGACCAT
CAACTCCTTC ACTGTGGCAA AGTTGGCTTT AAAAATATGG AGGGAGACTA TGTGACCTAT
GAGGCAATCC CTCACGAAGA CTTTTTGAAA TATCAGAAAA TATTAGGATT AGGTGATAAA
GATGTATTCG AAAACTAA
 
Protein sequence
MIMIADEIIR IDKFISDELE EIPREKIKDF IKDKKIKVNN SFVKPSFKLS EGDEIEIDDS 
LFHVPELKAE DMELKIVYEN DDYAIIDKDS NVIVHPAGKI ITGTLVNGLL GRYGYDGLSH
IGGDDRPGIV HRLDKDTTGL IAITKTNEAY KYFKKMFETR KVDKYYYAIV FGNFDKKKGT
IDNFMDRDVH NRRKMAVRNT GRRAVSHYEV ISEVEGFSLV RIKIETGRTH QIRVHMTHIN
HPILGDPVYG NVKHKFNLDH QLLHCGKVGF KNMEGDYVTY EAIPHEDFLK YQKILGLGDK
DVFEN