| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0510 |
|---|
| Symbol | |
|---|
| ID | 8397287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 584132 |
|---|
| End bp | 585409 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644994869 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_003152278 |
|---|
| Protein GI | 257066022 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.249513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA ATAAGAAAAA GAAACTAGGA CTCTCCCAAC AAATATTTAT AGCCTTAATT
GCAGGACTTG TAGTTGGAAT CCTAATCCAC TACTTCATGC CAGCCGGCCA CTTCCGTGAT
GATGTCCTAG TAGAAGGAAT ATTTTACACC ATAGGACAAG TTTTTATCAG GCTTATGCAA
ATGCTAGTAG TTCCACTAGT ATTCTTCTCT ATAGCGGACG GCTGTAGAAA CTTAGGAGAT
ACGGAAACCC TAGGTAAGGT TGGAGTAAGA ATTGTATTAT TTTATATATG TACAACAGCT
CTTGCAATAT TTTTATCCCT AATGCTTGCA AGAATTATCG GTCCAGGCAA GGGAATGAAT
ATGAGCCTAG GAGCTAATGA GTTCGAGGTA GACGGAGGAG AAGAATTCTC CCTATCAAAA
ACCATCCTAA ACTTTGTTCC AACCAACCCA ATAGGTGCCC TAGCCAATGG AGAAATGATC
CAAATAATTA TATTTGCAGT TATAGTAGGT CTACTCATAG CTTCTATGGA AGATAGGCTA
ATCACATTGG GAAATGTCGT GACAGAGATG AACGATCTAA TGATGGGAAT GACCATGTGG
GTAATGAAAC TTGCCCCAAT CGGAGTATTC TTCCTCATAT CAAGGACCTT CGCATCTCTT
GGTTATGATG TAATAATCTC CATGCTATCA TACATGGCGA CTGTACTTGG TGGACTTTTA
GTACAACTTA TACTTGTCTA CATGGTCTTA CTTACAGTAT TTACTAGAGT CAATCCGATA
AACTTCCTAA AGAAGTTTGC TCCAGTAATG ACCTTCGCCT TCTCTACTGC ATCAAGTAAC
GCAACAGTTC CAGTAAATAT CAAAACCCTA GAAGAAATGG GAGTAGATAG AAAAATATCT
TCCTTTACCA TTCCCCTAGG AGCGACCATC AACATGGACG GAACTGCCAT CATGCAGGGA
GTTGCGGTAG TCTTTATTGC AAACGCCTAT AACATCGACC TAACGGCAGC AGACTTTGCT
ACAGTAATAC TTACAGCGAC AATAGCATCA GTAGGAACAG CAGGAATCCC ATCTGTCGGA
CTAATCACCC TATCCATGGT CCTTCAATCA GTAGGACTTC CAGTAGAAGG AATAGCGATG
ATCATGGGTA TTGACAGAAT CCTAGACATG GCAAGATCTG CCATAAACAT CTCAGGAGAT
GCCACTGGAA CAATAATAGT AGCAAACTCA GTAGGATCCT TTAACAAGGA AAAATATATT
AGAAAAGTTG AAAAATGA
|
|---|
| Protein sequence | MEKNKKKKLG LSQQIFIALI AGLVVGILIH YFMPAGHFRD DVLVEGIFYT IGQVFIRLMQ
MLVVPLVFFS IADGCRNLGD TETLGKVGVR IVLFYICTTA LAIFLSLMLA RIIGPGKGMN
MSLGANEFEV DGGEEFSLSK TILNFVPTNP IGALANGEMI QIIIFAVIVG LLIASMEDRL
ITLGNVVTEM NDLMMGMTMW VMKLAPIGVF FLISRTFASL GYDVIISMLS YMATVLGGLL
VQLILVYMVL LTVFTRVNPI NFLKKFAPVM TFAFSTASSN ATVPVNIKTL EEMGVDRKIS
SFTIPLGATI NMDGTAIMQG VAVVFIANAY NIDLTAADFA TVILTATIAS VGTAGIPSVG
LITLSMVLQS VGLPVEGIAM IMGIDRILDM ARSAINISGD ATGTIIVANS VGSFNKEKYI
RKVEK
|
|---|
| |