| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0491 |
|---|
| Symbol | |
|---|
| ID | 8397267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 562920 |
|---|
| End bp | 563756 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644994849 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritolkinase |
|---|
| Protein accession | YP_003152259 |
|---|
| Protein GI | 257066003 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAA AATGTTATGC TAAGGTTAAT CTTACCCTCG ATAGCCTATC GAAAAGAGAT
GATGGTTATC ACGAAATCGA TAGTATTATG GTTAGGATTA ATCTGTTTGA TAAATTGATT
ATAAAGAAAA ATAAAGAAAA TAAATTTAAT TACGAAACTA ATACCCCTAA TATCTGTGCC
CTTGAGGATA ATCTTATCTA TAAGGCTTGG TGTTTACTTA AAGATAGGGT GGACGAAAAT
GGAGTCGATG TGACTTTGAT CAAAAATATT CCCCTAGCGG CAGGTCTTGC GGGAGGCTCT
ACTGATGCAG CAGAGATGAT CAAGGGACTT GATAAGCTTT GGGATTTGGG TCTAACTATT
GATGAGAGGA TGTGTCTTGG CAAAAAGCTA GGAGCAGATA TTCCTTTCTT CTTCCTAGAA
TCAAATGCCA GAGCCCAAGG GATCGGAGAG ATACTCACAC CTTTTACCAA CAAGCTTAAG
ATGAAGCTTC TTCTCATAAA TGACGGAACA GAGATTTCTT CCGCCTTTAT CTACAAGAGA
CTTGCTGATT ATGGAGTCAT AGATACTAGT GAAATTATTG ATAAGCTTCG CAAGGGAGAA
AAATCTGCAA TCTCTGGCTT TAGAAATGTG ATGGAAGATG TAATTTTTGA AAATTTCCCT
CATATTAGAG AAATTTGCTC AAGGCTTGAA GATATAGGCG CGGAAAAGGC CCTCGTAAGT
GGATCTGGGG CTAGTGTCTT TGGAGTTTTC ACTGATGATT ATAGTCTCAA TCTTGCCTAT
GAGAAGCTTT CTGATAAGTA TAAGTTCGTA GAGAAAGTGG AGTTAGTAGA TGACTAG
|
|---|
| Protein sequence | MERKCYAKVN LTLDSLSKRD DGYHEIDSIM VRINLFDKLI IKKNKENKFN YETNTPNICA
LEDNLIYKAW CLLKDRVDEN GVDVTLIKNI PLAAGLAGGS TDAAEMIKGL DKLWDLGLTI
DERMCLGKKL GADIPFFFLE SNARAQGIGE ILTPFTNKLK MKLLLINDGT EISSAFIYKR
LADYGVIDTS EIIDKLRKGE KSAISGFRNV MEDVIFENFP HIREICSRLE DIGAEKALVS
GSGASVFGVF TDDYSLNLAY EKLSDKYKFV EKVELVDD
|
|---|
| |