Gene Apre_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0467 
Symbol 
ID8397242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp533274 
End bp534272 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID644994824 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003152235 
Protein GI257065979 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0177179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATT TAAATAAAGA AATGTTAAAA ATTGAAGACC TTAGTATATC TTTCTACACT 
CCAGTAGGAG AGGTCAAGGC GGTAGATTCT ATAAGCTACA CTCTCCATGA GAATGAAATC
ATGGGGATCG TTGGAGAATC AGGTTCTGGT AAATCAGTAG AAAGTTATGG AATTATGGGA
CTTTTACAAA GTCCAGGCAA GGTCAAAAAC GGGAAAATCC TATACAAGGG AGAAAATGTC
CTAGATTATG ATAAAAAGCA AATGTCATCT TTTAGGGGAG CTAAGTGCTC CATGATCTTC
CAAAATCCGA TGACTTGTCT TAACCCAGTC TATACAATAG GTAACCAGCT TATGGAGGCT
GTCTTAGTTC ACAAGGACAA AAGTAAAAAA GAAGCCTATG ATCTGGCAGT CGAAATGCTA
GATCTTGTAG GAATATCCAA TCCAGAAAGG CGAATGAAGC AATATCCTCA CGAGCTTTCT
GGAGGTATGA GACAGAGAGT TATGATTGGT ATGGGGCTAA TTTGTAAGCC CGATATCCTT
ATAGCTGATG AGCCAACTAC AGCCCTAGAT GTTACAATCC AAGCTCAGAT TCTTGAACTT
ATCAAAGATA TACAAGAAAA AAATAAGATG AGCGTAATTT TTATCACTCA CAACCTGGCT
GTAGTTGCTC AAATATGTGA CACAGTTAGT GTAATGTATG CTGGAAGAAT TGTAGAGCAG
GGAAGTGTAG ACGATATATT CTATAGACCA AGCCATCCTT ACACCAAGGG CCTGCTTAAA
TCTATGCCAA GAATTGACGT AGGAGATAAG ACAAGGCTTG AAAGCATCAA GGGAGTACCG
GTAGATATGC TTAATCCACC AGAAGGATGT GGATTTTCTA CAAGATGTGA GTCCTGTATG
AATATATGTT TAAGAAAAGA ACCTCCTATG ATTGAACTAG GAGATGGACA TAGGTCCAAG
TGCTTCCTTC ATGTAAAGGA GCTTTTAAAT GCAAGATGA
 
Protein sequence
MENLNKEMLK IEDLSISFYT PVGEVKAVDS ISYTLHENEI MGIVGESGSG KSVESYGIMG 
LLQSPGKVKN GKILYKGENV LDYDKKQMSS FRGAKCSMIF QNPMTCLNPV YTIGNQLMEA
VLVHKDKSKK EAYDLAVEML DLVGISNPER RMKQYPHELS GGMRQRVMIG MGLICKPDIL
IADEPTTALD VTIQAQILEL IKDIQEKNKM SVIFITHNLA VVAQICDTVS VMYAGRIVEQ
GSVDDIFYRP SHPYTKGLLK SMPRIDVGDK TRLESIKGVP VDMLNPPEGC GFSTRCESCM
NICLRKEPPM IELGDGHRSK CFLHVKELLN AR