Gene Apre_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0410 
Symbol 
ID8397184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand- 
Start bp466163 
End bp466777 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content39% 
IMG OID644994768 
Productthiamine pyrophosphokinase 
Protein accessionYP_003152180 
Protein GI257065924 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT GTTATATAAT TGGAGGAGGA AGCTTCGATG GCTTCTTCGA CGAAATAGGA 
AAAGATGACC TAGTCCTTGC AGCTGATAGG GGCTATAGAC TTGCAAAAGA AGAAGGCATC 
AAGGTCGACT ACATCATAGG AGATTTCGAC TCATCCAAAA GACCAGAAGA CGATCACGTA 
ATAGCCCTAA ACCCAATCAA GGACTATACT GATACCGTTG CTGCTATAGA ATTCGCCAAA 
GAAAAAGGCT ATAAGAAAAT CATAATTTAC GGGGGACTTG GAGGAAGGGA AAGCCACACC 
ATATCAAATA TCCGTACAAT CTACCATTAC CAAAAACAAG GAATCGATAT AAAACTAAAA 
TCGAAATCTA AGGAAATATT TGTAGTAAAC GATAAATTCG CCTACACTTA CCAAAACCAC 
GACTTCTACG TATCAATATT TTCCCTAAAT GATAATACAA GGCTTACAAT TAAGGGACTC 
TACTACGAAC TAGAAGACTA CAAGATGAAA ATCGACGACG CCCTCGGGGT GTCAAATGAA 
ACAAAGAAAG AAGATTTTGA AATAGAGGTA AAAGACGGGG CTGTAGTTGT GGTCTTTGAG 
GATAAGGATT GCTAG
 
Protein sequence
MKTCYIIGGG SFDGFFDEIG KDDLVLAADR GYRLAKEEGI KVDYIIGDFD SSKRPEDDHV 
IALNPIKDYT DTVAAIEFAK EKGYKKIIIY GGLGGRESHT ISNIRTIYHY QKQGIDIKLK 
SKSKEIFVVN DKFAYTYQNH DFYVSIFSLN DNTRLTIKGL YYELEDYKMK IDDALGVSNE 
TKKEDFEIEV KDGAVVVVFE DKDC