| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0294 |
|---|
| Symbol | |
|---|
| ID | 8397068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 328016 |
|---|
| End bp | 328735 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644994654 |
|---|
| Product | MIP family channel protein |
|---|
| Protein accession | YP_003152066 |
|---|
| Protein GI | 257065810 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000803178 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATA TTATAATGGG TGAATTTTTC GGAACAATGA TTCTTATACT ACTCGGTGAC
GGCGTAGTAG CAAACGTTTT ACTCAATAAG AGTGGACAAA AAGGTGGAGG CTCTGTCCAA
ATCACATTTG CATGGGGTCT TGCAGTACTA GTCCCTGCAT TTATATTTGG AAAACTATCT
GGCGCAAGCT TTAACCCAGC TTTATCAATC GCCTTAGCTT TTAAGGGAGA TGTCGCTTAC
TCTGACTTAC CAGCTTATAT CATAGCTCAA TTGGCTGGTG CCTTCGTTGG TGCTGTTTTG
GTATATATTC TCTTTAAAGA CCACTACGAT GCAACTAGCG ATGAACCACT CACTGTAAGA
GCTACTTTCT GTACAGCTCC AACTATACCA AATACTTTTA GAAACCTACT TTCAGAAATC
ATCGGTACTT TCGTACTAGT ATTTGCTATC CTAGGTCTTT CTCAAGTAGA CGGAGCAGGA
ACTGTCGGAG TTGATAAGTT TTTAGTATTC GGAATAATCG TCTCAATCGG TATGTCTTTG
GGTGGACTAA CAGGTTATGC CATAAATCCT GCCAGAGACC TTGGACCAAG AATTGCCTAT
GCAGTACTTC CATTCAAAAA CAAGGCAGAC CCTAACTGGG GATATTCTTG GATTCCAGTA
GTAGGACCAA TCTTAGGTGG TCTACTAGCA GTAGTAATCT ATAACTTTAT CTTTATATAA
|
|---|
| Protein sequence | MRDIIMGEFF GTMILILLGD GVVANVLLNK SGQKGGGSVQ ITFAWGLAVL VPAFIFGKLS
GASFNPALSI ALAFKGDVAY SDLPAYIIAQ LAGAFVGAVL VYILFKDHYD ATSDEPLTVR
ATFCTAPTIP NTFRNLLSEI IGTFVLVFAI LGLSQVDGAG TVGVDKFLVF GIIVSIGMSL
GGLTGYAINP ARDLGPRIAY AVLPFKNKAD PNWGYSWIPV VGPILGGLLA VVIYNFIFI
|
|---|
| |