Gene Apre_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0258 
Symbol 
ID8397032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp291094 
End bp292299 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content38% 
IMG OID644994619 
ProductArginine deiminase 
Protein accessionYP_003152031 
Protein GI257065775 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TCAATGTAAA TAACGAAATC AACAAACTCA AGAAGGTCCT CGTTCACAGA 
CCTGGAGATG AACTTCTAAA TCTTACACCA AATGCCTTGG ACGAGTTACT CTTTGATGAC
ATACCGGACC TGGACAAGGC CAAGGAAGAG CACGACGCAT TTGCTCAAAT TTTTAGAAAT
GAGGGAGTAG AGGTAGTTTA TCTTGAAGAC TTGATGGCAG AGACTCTCAA AGATAGTAAG
GACCTCAAAG AAAAATTCCT TGACCAATAC CTAAAAGAGG CAGATATAGA TGATGACCTA
GTCCTTAGTG AGGCGAGAAA GCTCTTAGCT TCTATCAAAG ACGAGAAAGA ATTCGTCCTA
AAAACTATGG CAGGTCTTAC CCTAAATGAG TTAGGAATCA AAAATGACCA CGTCTTATTT
GACTATAAAT ACACTGCTAT AAATCCCATG CCAAACCTTT ACTTTACTAG AGATCCCTTC
TCCACAATAG GAAAGGGAGT ATCCATCAAC ACAATGTATT CAGTGACAAG ATCAAGAGAG
ACTATCTATG CTGACTACAT ATTTAACCAC CACAAGGATT ACAAGGGTAC TAAGAATTAT
TATGGTAGGG GAAAGAAATA CCATATCGAA GGCGGAGATA TATTAAATAT CAACGAGAAG
CTCTTGATGA TAGGTATTAG CCAAAGGACT CAGCTTGCTG CCATCAAGGA CCTAGCTCAT
AATATCTTAT TTGATGAGGA ATCTAAAATA GAAGAAATAA TTGCAATAAA CATCCCTAAT
GAAAGAGCCT ACATGCACTT AGATACTGTC TTTACTCAAA TCGATTACGA CACCTTCACC
TACCATCCTG GAATAATTTC TACCTTCCAT GCTATTAAAT TTAGCAAAAA AGACGATAAG
ATCGTAGAAG ATATAATAGA AAAATCCTTA GACGACCTCT TAAAAGATTC TCTAAAGCTC
GATGAAATAA AACTTCTCCC TTGCGGGGGA GGAGATCCTA TAGCAGCCCT TAGAGAACAA
TGGACAGACG GATCAAATAC CCTAGCTATT GCTCCAGGTA AGGTAATTGT TTATAAGAGA
AATACCGTAA CTAATCAAAT GCTTGAGCTA AATGGCATAG AAGTAATAAA GCTTGACTCA
TCAACCCTAA CAGTAGGTAG GGGAGGACCA AGATGTATGT CCATGCCACT TGTAAGAGAA
GACTAA
 
Protein sequence
MKNINVNNEI NKLKKVLVHR PGDELLNLTP NALDELLFDD IPDLDKAKEE HDAFAQIFRN 
EGVEVVYLED LMAETLKDSK DLKEKFLDQY LKEADIDDDL VLSEARKLLA SIKDEKEFVL
KTMAGLTLNE LGIKNDHVLF DYKYTAINPM PNLYFTRDPF STIGKGVSIN TMYSVTRSRE
TIYADYIFNH HKDYKGTKNY YGRGKKYHIE GGDILNINEK LLMIGISQRT QLAAIKDLAH
NILFDEESKI EEIIAINIPN ERAYMHLDTV FTQIDYDTFT YHPGIISTFH AIKFSKKDDK
IVEDIIEKSL DDLLKDSLKL DEIKLLPCGG GDPIAALREQ WTDGSNTLAI APGKVIVYKR
NTVTNQMLEL NGIEVIKLDS STLTVGRGGP RCMSMPLVRE D