Gene Apre_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0175 
Symbol 
ID8396926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp203262 
End bp203966 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content35% 
IMG OID644994513 
Product4-diphosphocytidyl-2C-methyl-D- erythritolsynthase 
Protein accessionYP_003151948 
Protein GI257065692 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATG GAAAATTTAT ATCTGCAATA ATTACAGCAG CAGGCTCAGG TCTTAGGATG 
AGATCTAAGA TTAACAAGCC CTACATTGAA GTAGGAGGAA GAAAGGTCCT AGAGATCACC
CTAGATACTG TAAGTAGAGT AAAAGAGATA GATGAGATAA TACTAGTCAT AAGAAAAGAT
GACGAGGATA TAATAAAAGA TATTTTAGAA AAATATGATG GAAATATAAG ATACGTATAT
GGTAGTACAA CTAGGGAGCT TTCAACCTTT GAAGGACTAA AAGCTCTTGA TCCACAAAGC
GAATTGGTCT TAACTCATGA TGGGGTAAGA CCTTTTGCAA GCGAAGAACT TTTCCTAAAG
ACTATCAATG CTTTAAGGAA AAACAAGGCG GTGATTACTG CTACCAAGTC AAAGGATACA
GTAAAGATTA TAGATGATGA TATGTACGTA GACTTTACAC CCAATAGGGA CTATGTCTAT
AACATCCAAA CTCCCCAAGC CTTTGACAAA AAGCTTATAT ATGCCATGTA TGAGAAATAT
CTTGCTAGCG AATTTAAAGT AACAGATGAC TCCCAACTTT TTGAATTCTT CGATAGGGAT
GAGAAGGTCA AGGTAGTCCA CGGAGAGTAT TCGAATATAA AAATAACAAC TCAAGAGGAT
ATAATTTTTG CAAATGCATA TCTTCAGAGG AAAAAGGACG TATAA
 
Protein sequence
MIDGKFISAI ITAAGSGLRM RSKINKPYIE VGGRKVLEIT LDTVSRVKEI DEIILVIRKD 
DEDIIKDILE KYDGNIRYVY GSTTRELSTF EGLKALDPQS ELVLTHDGVR PFASEELFLK
TINALRKNKA VITATKSKDT VKIIDDDMYV DFTPNRDYVY NIQTPQAFDK KLIYAMYEKY
LASEFKVTDD SQLFEFFDRD EKVKVVHGEY SNIKITTQED IIFANAYLQR KKDV