| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0142 |
|---|
| Symbol | |
|---|
| ID | 8396893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 168758 |
|---|
| End bp | 169849 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644994480 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003151915 |
|---|
| Protein GI | 257065659 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATT TAAAATTAGA ACACATAGAT AAAATTTATC CTAATGGAGT TCAGGCAGTA
TTTGATTTTA ATTTAGAAAT TGAAGATAAG GAATTCATAG TTTTTGTAGG ACCTTCTGGT
TGTGGAAAGT CTACAACACT TAGAATGATT GCAGGCCTTG AGGAAATTTC TGAGGGGAAT
TTATACATTG ACGGCGAGCT TATGAATGAG GTAAGTCCCA AGAATAGAAA TATCGCTATG
GTATTTCAAA ACTACGCCCT CTATCCACAC ATGACAGTTT TTGACAACAT GGCCTTTGGT
CTTAAGCTTC AAAAGGTAGA CAAGGCTGAG ATTAAGAAAA AGGTAGAAAG AGCAGCAGAA
ATGCTCGAGT TGACTAATCT TTTGGATAGA AAGCCTGCGG CCTTATCTGG AGGACAAAGA
CAAAGAGTTG CCCTAGGGCG AGCCATAGTA AGGGAAGCTG ATATCTTCCT TATGGATGAG
CCTCTATCTA ACCTAGATGC TAAGCTTAGG GTTCAGATGA GAACAGAAAT ATCCAAAATT
CATGACCAGC TTGATACTAC AACTATTTAC GTAACTCACG ATCAGACTGA GGCTATGTCA
ATGGCTTCAA GGATTGTAGT AATGAAAGAT GGCTATATGC AACAGGTTGG AACTCCAGAG
GAAATCTATG ACTCTCCAGC TAATATTTTC GTTGCAAACT TTATTGGTTC TCCTCCAATG
AACTTCTTTA ATGGAAAAGT AGTAAATTCC AAGATTCAAG TTGGTAATGA TGATATTCCA
GTAACTAATG AGCAAAAAGA AGCTTTAAAA TCCTACGAAG CTAAGGAAAT AATAGTTGGA
ATAAGACCAG AATCTTTTTC TATTAATACC GAAGGGAAAA GCGCTAAATC AATCAAAGCA
AGGATAGAAA ATATAGAAAT GCTTGGGGAT GAATCTATCC TTTATGCAAG AGCAGAAGAA
GCTGCAAGCC AGATAGCAGT AAAGGTCCAA GGAAAGTTTA AAGGAATAGA TAAAAACGAC
GAGATTAATC TAGATATAAA CTTGGATGAA ATCCACCTAT TCGATAAAGA TACGTCAATG
AGAATTGTAT AA
|
|---|
| Protein sequence | MANLKLEHID KIYPNGVQAV FDFNLEIEDK EFIVFVGPSG CGKSTTLRMI AGLEEISEGN
LYIDGELMNE VSPKNRNIAM VFQNYALYPH MTVFDNMAFG LKLQKVDKAE IKKKVERAAE
MLELTNLLDR KPAALSGGQR QRVALGRAIV READIFLMDE PLSNLDAKLR VQMRTEISKI
HDQLDTTTIY VTHDQTEAMS MASRIVVMKD GYMQQVGTPE EIYDSPANIF VANFIGSPPM
NFFNGKVVNS KIQVGNDDIP VTNEQKEALK SYEAKEIIVG IRPESFSINT EGKSAKSIKA
RIENIEMLGD ESILYARAEE AASQIAVKVQ GKFKGIDKND EINLDINLDE IHLFDKDTSM
RIV
|
|---|
| |