Gene Apre_0138 details

Gene Information

• Locus tag: Apre_0138
• ID: 8396889
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 163260
• End bp: 165086
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644994476
• Product: flavocytochrome c
• Protein accession: YP_003151911
• Protein GI: 257065655
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01813] flavocytochrome c

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000254788
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCTA AAAAATTATT TGCAAGTCTA TCCCTAATAC TTGCCCTAAC ATCTTGTGCT 
TCTCAAAGTC CAAAGACTAC AGAAGAAACT AAAGAAGATG TCAAGACAGA AGAAAGTGCA 
TCAAAAGAAT CTAAGAAAGA TTCAAAAATA GAAGAAATAT CAGGTACATA TGAAGGATCT 
GCCAAGGGAT ATGGCGGAGA TATCAAGGTT AAAGTGACCC TAGATAAGGG AGAGATCACA 
GACATAGAAA CAGAAGAAAG CGAAACTAAA TCAGTAGGAT CTGCTGGAAT CGAAAGAGTT 
AAGGAAGAGA TAATTGCCAA AAATTCAACT GATGTAGACA GAACTACAGG GGCCACCATC 
TCATCAGCTG CCTTTATCTC AGCTGTAAAC GAAGCCCTAC TTACAGCAGG AATAGATTCT 
GATAAGCTTG TGGCCAAGGA AATCGAAGAT GACTTCAAGA CTCCAATCGA AACTGACGTT 
GTAGTAGTAG GTTCCGGTGG AGCAGGCCTA TCTGCTGCTA TCCAACTTGC CCAAGATGGT 
AAGAATGTTA CAGTCGTAGA AAAGGCAGGA ATTACAGGTG GTAACTCATC CCTTGCTTCA 
GGTGGAATGA ATGCATCTGA GACTAGACTT CAAGAAAAAG AAGGAATCCC TGATACTAAC 
GAGCTTTTCT TTGAAGATAC AATGAAGGGT GGCCATGACA TAAATAATCC AGACCTAGTT 
AGAAAAATGG TCGACTCATC ATCTGAAGCT ATCGATTGGC TAGAAGACAA TGGGGCTCCT 
TTGACTCAAC TTAAGTTTTC TGGTGGACAA AGTGAGATGA GAACCCACGC TCCAGTAAAT 
GATGAAGGAA AATCAATCCC AGTAGGATCC TACCTAGTAG ACAAGCTAAC TACAAAGGCC 
AAGGAATTGG GAGTAGATAT AATCTATGAT GCAAGGGTAA AAGAGATCCT AATGGAAGAT 
GGCAAGGCTA AGGGAGTTCT TGCGGAAACA AATAAGGGAG ATCTTACAGT AAATGCTAAG 
GCAGTTATAG TTGCAAGTGG TGGATTCGGT GCCAATATGG ACATGGTTGT AGAATATAAG 
CCAGAACTTG AAGGCTACGT ATCTACAAAT GCTAAGTCAA TTACCGGAGA TGCTGTTAAC 
TTCCTCAAAG AAGCTGGAGC AAACTTCATA GACATGGATC AAATCCAAAT CCATCCAACA 
GTTGTCCAAA AAGACGGATC TCTAATATCA GAAGGCCTAA GAGGAGAAGG GGCAATCCTC 
CTTAACCAAA AGGGAGAAAG ATTTGTAGAT GAGCTTGAGA CAAGAGACTT TGTATCCAAG 
ACTATCCTAG ACCAAGAAGG AAAAGCAGCT TATCTTCTAG TTGATCAAAA GATGATGGAT 
GAGTCAGCTA CTATCCAAAA ATACTACGAC AAGGGCCTAC TAGAAAAGGC AGAAGACTAC 
AAGGCTATTG CTGAAATTAT AGGATGCGAT GAAGAGACAG TTAAGAATTC TATAGAAAAA 
TGGAAGGAAA TCTGTGCCAA CAACGAAGAC CCTGACTTTG GAAGAAAGGG CATGGATAAG 
TCAAAATCCG ACCTATCTAA GGCTCCTTAC TATCTAGTTA AAATCGCTCC AGGAATCCAC 
CACACCATGG GCGGAGTCGA AGTAAACACA AACTCAGAAG TAATATCCAA AGAAAGTGCA 
CCAATTCCAG GCCTATACGC TGCAGGCGAA GTTACAGGAG GAGTTCACGG GGCAAATAGA 
CTCGGTGGCA ATGCTGTAAC TGACATAGTA GTATTCGGAA GAAACGCTGC CAAGTCAGCA 
GAAGAATATA TAAAAGAAAA TAACTAA 

 

Protein sequence

MKAKKLFASL SLILALTSCA SQSPKTTEET KEDVKTEESA SKESKKDSKI EEISGTYEGS 
AKGYGGDIKV KVTLDKGEIT DIETEESETK SVGSAGIERV KEEIIAKNST DVDRTTGATI 
SSAAFISAVN EALLTAGIDS DKLVAKEIED DFKTPIETDV VVVGSGGAGL SAAIQLAQDG 
KNVTVVEKAG ITGGNSSLAS GGMNASETRL QEKEGIPDTN ELFFEDTMKG GHDINNPDLV 
RKMVDSSSEA IDWLEDNGAP LTQLKFSGGQ SEMRTHAPVN DEGKSIPVGS YLVDKLTTKA 
KELGVDIIYD ARVKEILMED GKAKGVLAET NKGDLTVNAK AVIVASGGFG ANMDMVVEYK 
PELEGYVSTN AKSITGDAVN FLKEAGANFI DMDQIQIHPT VVQKDGSLIS EGLRGEGAIL 
LNQKGERFVD ELETRDFVSK TILDQEGKAA YLLVDQKMMD ESATIQKYYD KGLLEKAEDY 
KAIAEIIGCD EETVKNSIEK WKEICANNED PDFGRKGMDK SKSDLSKAPY YLVKIAPGIH 
HTMGGVEVNT NSEVISKESA PIPGLYAAGE VTGGVHGANR LGGNAVTDIV VFGRNAAKSA 
EEYIKENN