| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0100 |
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| Symbol | |
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| ID | 8396851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | + |
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| Start bp | 122156 |
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| End bp | 123520 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644994439 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003151874 |
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| Protein GI | 257065618 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0456451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAGA AATTAGACCT TACAAGAGGC CCTATCTGGC AAACCTTGGT TAAACTTTCA
ATCCCCCTAG CCCTAACAGC CTTTATACAA ATTGCTTACG GTTTTGTAGA TATGATTTGG
ATATCAAGGC TAGGAACCGA TGCTGTCGCA GGTGTGGGTA TTGCTGGATT TGTCTTTTGG
ATAGCCAACT CCCTTGCCCT TATACCAAAG GTGGGCACAG GGGTCTTCGC ATCCCAATCT
TACGGTCAAG GTAACGAAAA GGAGACTGTA AGGGTAATAA ATAATGGAAT AATTCAGGCG
ATGATTTTAG GTTTTTGCTT TACTATTTTT GTCTTAATTA TTAGGAATAT ATTTATAGAA
GCCTATAACC TGGGCGATGC TGCGGAACTT GCTGCAAAGA GATATCTTTT TATAGTAGCT
TGTGGGATGA TTTTCTTTTT TATAAATCCT ATGTTTTCAC AATCCTTCAC AGCCCTAGGA
GATTCTATAA GCCCCTTTAA GATAAATGCA GTAGGTCTTC TTGCCAATAT GATACTAGAC
CCGGTTTTGA TCTTTGGCTT TGGACCTCTA CCAGCCTTAG GCATAAGAGG AGCTGCTATA
GCGACTATCT TTAGTCAGTT TTTGGTTAGC CTTTGCTTTT TATTTCTTAT CATAAGGCAG
GACGATATAA TAAAGAAATC CATATCGAGG ATTGATTATA GGATGAATTG GCAGAAGGAA
ATATTTAAGC TAGGACTTCC TGCTGGAGTT TTGAGTGGTT TTCATGCTTC GATTTCTATG
ATACTAAATA GATTTATGGC AAGCTTCGGG CCGGTTCCAG TTGCAGTAGC CTCAATCGGA
GCTCAGCTTG AGTCAATTTC CTGGAATACG ACAGAGGGAA TCCAAGTAGG GATCCAGGCT
CTTGTCGGAC AAAACTATGG GGCAAAGAAG ATCGATAGGG TAATAGATAT AATAAAGGTA
AGCTTTAAGC TTGTAGCAAG CATTGGACTT ATAGCAAGTC TAGTCCTATT TTTCTTTAGA
TATAATTTAT TTAGTCTATT CACTCCAGGA GATAGTGAGG CCATAAGCTT AGGAGCTGAT
TATCTATTAA TCCTTTCCCT AAGCCAGCTT ATGATGGCAA TAGAAATTGG TCTAGCTGGG
GCCTTCAATG GGCTTTCTGA TACCAAAACT CCAGCTGTAA TAGGTCTTGT GATGAATACA
TCGAGAATCC CAATCTCCCT AATCCTTATG CCATTTTTGG GAGTTCATGG AGTATGGATC
GCCATGAGCC TAAGCTCAAA CTTCAAGGGA ATTCTTTCTA TGATTTTCCT ATCAAGGAAG
GTTAAGAAAT TAAAAAATGG ACATTATAAA GAGCCAGGAC TTTAA
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| Protein sequence | MNQKLDLTRG PIWQTLVKLS IPLALTAFIQ IAYGFVDMIW ISRLGTDAVA GVGIAGFVFW
IANSLALIPK VGTGVFASQS YGQGNEKETV RVINNGIIQA MILGFCFTIF VLIIRNIFIE
AYNLGDAAEL AAKRYLFIVA CGMIFFFINP MFSQSFTALG DSISPFKINA VGLLANMILD
PVLIFGFGPL PALGIRGAAI ATIFSQFLVS LCFLFLIIRQ DDIIKKSISR IDYRMNWQKE
IFKLGLPAGV LSGFHASISM ILNRFMASFG PVPVAVASIG AQLESISWNT TEGIQVGIQA
LVGQNYGAKK IDRVIDIIKV SFKLVASIGL IASLVLFFFR YNLFSLFTPG DSEAISLGAD
YLLILSLSQL MMAIEIGLAG AFNGLSDTKT PAVIGLVMNT SRIPISLILM PFLGVHGVWI
AMSLSSNFKG ILSMIFLSRK VKKLKNGHYK EPGL
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