Gene Apre_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0097 
Symbol 
ID8396848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp118822 
End bp119484 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID644994436 
ProductL-serine dehydratase, iron-sulfur-dependent, beta subunit 
Protein accessionYP_003151871 
Protein GI257065615 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.99373e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTTA ATGCATCAGT TTTTGATATA ATCGGGCCAA ATATGGTTGG TCCATCAAGC 
TCGCATACAG CTGGAGCTTG TAAGATCGCT CATACAGCAA GACGTATGGT AGATAGAAAT
TTTAACGAGG TTATCTTCTA CCTCCATGGC TCATTTGCCA AGACCTACAA GGGTCACGGT
ACAAACAGGG CCTTGGTTGG GGGAGTTTTG GGCTTTGATC CAGAAGACGA AAGGATTATC
AATGCCTTCG AATACGCCGA GAAGGCAGGC ATTAAATATT CTTTTGTAGA AACTGACCTT
GGAGATGTTC ATCCAAACAC AGTAAACATA GTGTTCAAAT ATCCTGACAG GGACGCCCTT
TCAGTTCAGG GCTCATCCAT AGGTGGTGGA GCTATAGTTA TTACAAAGAT GAATGGTAAT
GCAATCGAGT TTAAGGCGAA TAAGCCAACT CTTTTCATGA GCTATGCTGA ACAAAAGGGA
GTAATAGCCT TTGTTTCAGG AATTCTTTTC GATAATGGCT ACAATATCAA CACTATGAAG
ACTATTAAAG AAGATAATAA TGTAATGTTA GTTTGTGAGC TAGACGAACC ACTAAGAGAA
GATATTTTAC AAAAAATTAG AGATGGTAAA GATTTTACCT TTATCAAATA TATAGGGGTA
TAG
 
Protein sequence
MTVNASVFDI IGPNMVGPSS SHTAGACKIA HTARRMVDRN FNEVIFYLHG SFAKTYKGHG 
TNRALVGGVL GFDPEDERII NAFEYAEKAG IKYSFVETDL GDVHPNTVNI VFKYPDRDAL
SVQGSSIGGG AIVITKMNGN AIEFKANKPT LFMSYAEQKG VIAFVSGILF DNGYNINTMK
TIKEDNNVML VCELDEPLRE DILQKIRDGK DFTFIKYIGV