Gene Apre_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0096 
Symbol 
ID8396847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp117514 
End bp118740 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content38% 
IMG OID644994435 
Productsodium:dicarboxylate symporter 
Protein accessionYP_003151870 
Protein GI257065614 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000435647 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA CTAAAAAAAT TGGACTAATT CCAAGAATGA TTCTTGGTAT CTTAGTCGGT 
ATCTTGGTAG GCTTATATCT ACCAATGTGG TTTACAAGAA TCACAGTAAC ATTCTCGTCA
ATCTTCGGGG CTTTCCTAAA CTTCATAATC CCACTTATGA TTTTAGCTTT CGTTACCAAG
GGTATAGCAG ACCTAGGCGA GGGGGCAGGT AAGCTTTTAG GAGTAACAGT TTTACTTGCT
TATATGTCAA CACTAATCGG TGGTTCCTTG TCATATTTTA TGTCAAATGC AATTTTCCCT
GGCTTTATTT CAGCTGAACA AGTTTCTGCA ATTCAAAGCT CTAACGAAAT TAGCATAGAT
CCATACTTCG AGGTTCCTAT CACACCATTT TTTGATGTAA CTAGTGCTAT TATCTTTGCT
TTCATGCTAG GTATCTCAAT ATCTTGGCTA AGAAAGACAA AGCAAGGAGA AATCCTTTAC
AAGGCAGTTG GTGAATTTAA TATAATAATT ACCAATGTTT TGGCTAAGGC TATCGTTCCA
CTACTACCAT TTTTCATCTT AGGTAACTTT GCGAAAATGG CAAAATCTGG ATCAGTATTT
GCAGTATTAT CCATCTTCTG GAAGATATTC ATCTGCGTAA TAGCCCTTCA CTTGATATAT
GTATCTGTTT TATTTATAAT ATCAGGATCA TATACAGGAA AGAATCCTTT CACTATGCTC
AAAAATCAAG TAAAAGGTTA CCTAACAGCA GTTGGAACCC AATCATCTGC AGCTACCATT
CCAGTAAACC TACAATGTGC TGAAAATAAC GGTGTAAGTC GTGAGATCGG TGATTTTGTA
ATCCCACTAG GTGCAACAGT CCACATGCCA GGTTCAATGA TTACAATCAC TGCTTGTACA
TTTACAATCC TTACAATGTA CGATATGCCA CACTCTTATG GGCTTATCCT AAGGCTTATA
GCAATCCTTG GAATTGCAAT GGTTGCAGCA CCAGGAGCAC CAGGTGGAGC GGTAATGAGT
GCCCTACCAT TCCTACCTGT AGTAGGAATT TCACCAGAAT CAACAATGGC AAGCTTACTA
ATAACCCTAT ACCTAACCCA AGACTCATTT GGAACAGCTG CCAATATTTC TGGAGACACA
GCGCTTGCAG TAGCGGTAGA TAAAATTTAT AATAAGAATA TACTAGGTAA AAAAGACTGG
CAACCAAACC CAGTCAAAAC TAAATAG
 
Protein sequence
MQKTKKIGLI PRMILGILVG ILVGLYLPMW FTRITVTFSS IFGAFLNFII PLMILAFVTK 
GIADLGEGAG KLLGVTVLLA YMSTLIGGSL SYFMSNAIFP GFISAEQVSA IQSSNEISID
PYFEVPITPF FDVTSAIIFA FMLGISISWL RKTKQGEILY KAVGEFNIII TNVLAKAIVP
LLPFFILGNF AKMAKSGSVF AVLSIFWKIF ICVIALHLIY VSVLFIISGS YTGKNPFTML
KNQVKGYLTA VGTQSSAATI PVNLQCAENN GVSREIGDFV IPLGATVHMP GSMITITACT
FTILTMYDMP HSYGLILRLI AILGIAMVAA PGAPGGAVMS ALPFLPVVGI SPESTMASLL
ITLYLTQDSF GTAANISGDT ALAVAVDKIY NKNILGKKDW QPNPVKTK