| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0089 |
|---|
| Symbol | |
|---|
| ID | 8396840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 109088 |
|---|
| End bp | 109945 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644994428 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_003151863 |
|---|
| Protein GI | 257065607 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.194579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAGA TAAAAAATAT AAATCGTATG GCAGTCCAAG CCATAGCGAC TCTACTTACA
AATATCCATA TCCCCAACTT CTTTAAAGGA AATATCTATA CAGGCTCAAC GAAAAGGGCT
TGCGTACCTG GACTTAACTG TTACTCCTGC CCGGGAGCTG CTGGATCTTG CCCCATAGGA
TCTATGCAAG CTGTAATGGG TGCCAAAAAA TACAAATTTT CCTATTATGT TATAGGATTT
ATGATGTTTT TTGGAGTAAT ATTTGCAAGG CTTATATGCG GATTTCTTTG TCCCTTTGGA
TTCTTCCAAG ATTTATTGGC AAAGATTCCC TCTAAAAAAT TAAGTACTAA GAAACTAAAG
CCCTTGCGCT ATGTTAAGTA TCTGATTTTA ATAGGACTAA TGCTTGCCAT GTCACTTGTA
CTAGGCGATA AGTACGAAGT GGTTCCTCCC ATATTTTGCA AGTATATTTG TCCTCAAGGA
ATCTTAGAAG GTGCGATCCC ACTTGCTATC AAAAACCCAT CCCTAAGATT AGGACTCGGA
AGCTTATTTA ACCTCAAGCT TACGATTTTG ATCATAACGA TTATCCTATC TATAATATTC
TACAGACCCT TCTGCAAATG GATTTGTCCA TTAGGAGCAT TCTACTCCCT ATTTAACAAA
TACTCCTTCT ATCAGATGAA TGTAGATAAG CACAAATGCA TAGACTGCGG CAAATGTGCT
AGGGTTTGTA AGATGGATGT AGATATAAGA GAAAATGATC ACCATCTAGA ATGTATAAGA
TGCGGTGATT GCAAGAAGAA TTGTCCAACA AAGGCCATAT CTTCCTCATT TAGGCAAAGG
AGAGAAAATG AAGAATAA
|
|---|
| Protein sequence | MDKIKNINRM AVQAIATLLT NIHIPNFFKG NIYTGSTKRA CVPGLNCYSC PGAAGSCPIG
SMQAVMGAKK YKFSYYVIGF MMFFGVIFAR LICGFLCPFG FFQDLLAKIP SKKLSTKKLK
PLRYVKYLIL IGLMLAMSLV LGDKYEVVPP IFCKYICPQG ILEGAIPLAI KNPSLRLGLG
SLFNLKLTIL IITIILSIIF YRPFCKWICP LGAFYSLFNK YSFYQMNVDK HKCIDCGKCA
RVCKMDVDIR ENDHHLECIR CGDCKKNCPT KAISSSFRQR RENEE
|
|---|
| |