Gene Apre_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0086 
Symbol 
ID8396837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp107132 
End bp107803 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content38% 
IMG OID644994425 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003151860 
Protein GI257065604 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.30601e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC TGATAGTTGA AGATGAGAGA AAGCTTTTGA GACTTCTTGA TGAAGGATTA 
AGTCTTTTAG GCTATGTTAC AGATATGGCA AGGGATGGAA AAGAGGCCCT TGACCTTGCT
TTTGTAGAAG ATTATGACAT TATTATCCTA GATATTAATC TACCGAAGAA GGACGGCTTC
GAGGTCCTAA GAGATATAAG GCAATTTGAT AAGGAAGTAA ACATTATAAT GCTTACAGCA
AGAAGTGATA TAGACGATAG GGTGAAGGGC CTTGACTTTG GAGCCAACGA CTATATGACC
AAGCCTTTTG ATCTTAAGGA GCTTGATGCG AGGATGCGCT CTCTTCTTAG GAGAAAGTCC
ATCATGGAAG AAAAAGATAT CACAATTGAT GGGATAACTT TTGATACTGT CAAAAGAGAA
GTTATCTTTG AGGGCAGTCC CCTTACTCTA ACAGCTAAGG AGACTGGTAT TATCGAATAT
CTCTTCCTAA ATAGGGAAAG GTATGTGAGT GTCGAGGAGC TTATGAACCA CGTCTGGGAT
TCCAATGCAG ATGACTTCTC TAATACGGTA AGAGTTCATA TGTCTTCCTT GAGGAAAAAG
ATAAAGAAGG CCACAGGAAA AAATTATATA GAAAATGTTA TCGGCAAGGG TTATAAGATT
TATGAAAAAT AA
 
Protein sequence
MKVLIVEDER KLLRLLDEGL SLLGYVTDMA RDGKEALDLA FVEDYDIIIL DINLPKKDGF 
EVLRDIRQFD KEVNIIMLTA RSDIDDRVKG LDFGANDYMT KPFDLKELDA RMRSLLRRKS
IMEEKDITID GITFDTVKRE VIFEGSPLTL TAKETGIIEY LFLNRERYVS VEELMNHVWD
SNADDFSNTV RVHMSSLRKK IKKATGKNYI ENVIGKGYKI YEK