| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0071 |
|---|
| Symbol | |
|---|
| ID | 8396822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 89224 |
|---|
| End bp | 90570 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644994411 |
|---|
| Product | melibiose:sodium symporter |
|---|
| Protein accession | YP_003151846 |
|---|
| Protein GI | 257065590 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00245996 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG GGAAAATATC TACTAAAGAA AAGTATTCAT ATGGTATAGG TGCTATTGGA
AAAGATATGT GTGTTTGTCT TATATTTTAT TTTTGTATGT TATATTATAC AGACGTGTTA
CATATATCTG CTGGATTTGT TGGAACATTA TTTTTCCTTG CTAAGTTTTG GGATGCTATT
AATGACTTGG CTATGGGAAT GGTAGTTGAT AATACAAGAA CTAAGTGGGG TAAGTTTAGA
CCTTGGTTAG TAATAGGAAC GTTAGTTAAC TCAGTAGTTC TTATAATAAT GTTTAGTGAT
TGGGGCTTAA CTGGCACTAA TTTATACGTA TTTGCATCAA TTATGTATGT TTTATGGGGC
ATGACTTATA CAATTATGGA TATCCCATAT TGGTCTATGA TACCAAACTT AACATCTAAT
CCAAAAGAAA GAGATAAAAT TGCAGTAATA CCAAGAATAT TCGCTTCACT AGGTGGATTG
TTAGTAGCTG GGTTTGGATT GCAAATGGTT GATTACTTAG GTAAAGGTGA CCAACAAATA
GGATTTACTA GGTTTGCCTG GGTTGTTGCT ATTATATTCA TAGTAACTAT TGGGATAACA
GTTAAAAATG TAACTTCTGC TGATAAAATT AAAAATGAGA AAAGTAAAAA AATAACTTTT
AGACAAGTTT TAAAAGTTAT TAGACAGAAT GATCAACTAC TAGTAGCTGT AGCTACAATA
CTTGCATTCA ACTTTGCAAT GCAATGTATA GGAGGAGTTC AAACTTATTA TTTTATTTAC
GTTGCTGGAA ATAAAGCTTT ATTCTCAGTG TTTACTATAT TTGCAGGGTT AGCTGAGATG
TTTGGATTAT TAATTTTCCC AAAAATATCT GAAAGAATAT CTAAAAAACA AGTTTATTTA
TTGGCTAGCG GTGTACCTGT AATAGGGCTT ATTTTACTAT TAATTATTGG ATATGTTGCT
CCTCAAAACT ATATTTTGAC AGCTATAGCG GGAATACTTG TAAAATTAGG TTCAGGACTT
CAATTAGGAA CAGTTACAGT AGTACTAGCT GATGTTGTTG ATTATGGTGA ATATAAATTA
GGAACACGTA ACGAGTCAGT TGTATTTTCA ACTCAAACAT TGTTAGTTAA ATTTGCATCA
GCAATTGGTG CTTTGTTTAC TGGATTTGCT CTAGACCTTA CAGGTTATGT ACCAAATGCA
GTTCAATCAG TAGCAACTTT AAATGGGATT AGACTTATAA TGATTGGAAT TCCTATTGTA
TTTGTTATGA TTAGTTTCTT GATATTTAAG AAACGCTACA AGTTAACTGC TGTAAAAATG
AAAGAAGTAA TGTCAGCTAT ATCTTAA
|
|---|
| Protein sequence | MTEGKISTKE KYSYGIGAIG KDMCVCLIFY FCMLYYTDVL HISAGFVGTL FFLAKFWDAI
NDLAMGMVVD NTRTKWGKFR PWLVIGTLVN SVVLIIMFSD WGLTGTNLYV FASIMYVLWG
MTYTIMDIPY WSMIPNLTSN PKERDKIAVI PRIFASLGGL LVAGFGLQMV DYLGKGDQQI
GFTRFAWVVA IIFIVTIGIT VKNVTSADKI KNEKSKKITF RQVLKVIRQN DQLLVAVATI
LAFNFAMQCI GGVQTYYFIY VAGNKALFSV FTIFAGLAEM FGLLIFPKIS ERISKKQVYL
LASGVPVIGL ILLLIIGYVA PQNYILTAIA GILVKLGSGL QLGTVTVVLA DVVDYGEYKL
GTRNESVVFS TQTLLVKFAS AIGALFTGFA LDLTGYVPNA VQSVATLNGI RLIMIGIPIV
FVMISFLIFK KRYKLTAVKM KEVMSAIS
|
|---|
| |