Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0063 |
Symbol | |
ID | 8396810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 75954 |
End bp | 76829 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644994400 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003151839 |
Protein GI | 257065583 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAA GTAGGAATAT AAAAGAGATT AATGCTAAGC AAAGAGAAAA ATCTATAAAA AGAAGTCTTA AAAAAACTGA TATACTAAGA TTAATTTTAA ATATTGTAGT AGTTTTTTTT GTACTATTTC CTATAATCTA TGCATTCGTT ATGAGTGTAA AGCCTAGTCA TGAATTGTAC GATAAGACTT TTTTTACAGC ACATCCAACT CTAAATAACT ATAAGGATGT ATTTAAGATA GCCCCAATAG AAGGTTACAT AATAAATTCA CTTATAGTAT CTGTAATCAT AACTTTCTTT CAAATGGTAA CTGCTATTTT ATCTGCTTTT GCCCTTCACT TTCTAAATTT TAAGAAAAAG GGAATTCTAT TTGCGATAAT AATGGCGACA ACTATGATTC CTGGAGAAAC TACCATAATT TCAAACTTCT TGATGATTTC TGGATGGGGT TTTACAGATT CGTTTTTTGG ATTAGTTGCA CCTTATCTAA CTAGCGCTAT GGGAATTTTT CTCTTTAGAC AAGCTTTTAA GTCTTTTCCT ATGGAAATTT ATGAGGCAAG TAAGATAGAC GGAGCAAGTG ATTTGGGATT TATATTTAGA ATTCTGATCC CTCTTTCAAA ACCTACAATA GGGGCCTTGG CTGTACAATC TTTCTTGGGA GCATGGAATA TGTATATGTG GCCACTTCTT ATAACTGGAT CTGATAGATA TAGGACGGTG CAAATTGGTA TATCTATGCT AAATTCAGCA GATTCACAAT CGATGCTTTT GATGATAGCA GGGGTTGTAG TTTGTATGAT ACCATCGCTA ATAATATTTA TGTTCGCCCA AAAGAATATG GTAAAGGGAC TAACTACAGG AGCAGTAAAG GGGTAA
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Protein sequence | MQVSRNIKEI NAKQREKSIK RSLKKTDILR LILNIVVVFF VLFPIIYAFV MSVKPSHELY DKTFFTAHPT LNNYKDVFKI APIEGYIINS LIVSVIITFF QMVTAILSAF ALHFLNFKKK GILFAIIMAT TMIPGETTII SNFLMISGWG FTDSFFGLVA PYLTSAMGIF LFRQAFKSFP MEIYEASKID GASDLGFIFR ILIPLSKPTI GALAVQSFLG AWNMYMWPLL ITGSDRYRTV QIGISMLNSA DSQSMLLMIA GVVVCMIPSL IIFMFAQKNM VKGLTTGAVK G
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