Gene Apre_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0063 
Symbol 
ID8396810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp75954 
End bp76829 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content33% 
IMG OID644994400 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003151839 
Protein GI257065583 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTAA GTAGGAATAT AAAAGAGATT AATGCTAAGC AAAGAGAAAA ATCTATAAAA 
AGAAGTCTTA AAAAAACTGA TATACTAAGA TTAATTTTAA ATATTGTAGT AGTTTTTTTT
GTACTATTTC CTATAATCTA TGCATTCGTT ATGAGTGTAA AGCCTAGTCA TGAATTGTAC
GATAAGACTT TTTTTACAGC ACATCCAACT CTAAATAACT ATAAGGATGT ATTTAAGATA
GCCCCAATAG AAGGTTACAT AATAAATTCA CTTATAGTAT CTGTAATCAT AACTTTCTTT
CAAATGGTAA CTGCTATTTT ATCTGCTTTT GCCCTTCACT TTCTAAATTT TAAGAAAAAG
GGAATTCTAT TTGCGATAAT AATGGCGACA ACTATGATTC CTGGAGAAAC TACCATAATT
TCAAACTTCT TGATGATTTC TGGATGGGGT TTTACAGATT CGTTTTTTGG ATTAGTTGCA
CCTTATCTAA CTAGCGCTAT GGGAATTTTT CTCTTTAGAC AAGCTTTTAA GTCTTTTCCT
ATGGAAATTT ATGAGGCAAG TAAGATAGAC GGAGCAAGTG ATTTGGGATT TATATTTAGA
ATTCTGATCC CTCTTTCAAA ACCTACAATA GGGGCCTTGG CTGTACAATC TTTCTTGGGA
GCATGGAATA TGTATATGTG GCCACTTCTT ATAACTGGAT CTGATAGATA TAGGACGGTG
CAAATTGGTA TATCTATGCT AAATTCAGCA GATTCACAAT CGATGCTTTT GATGATAGCA
GGGGTTGTAG TTTGTATGAT ACCATCGCTA ATAATATTTA TGTTCGCCCA AAAGAATATG
GTAAAGGGAC TAACTACAGG AGCAGTAAAG GGGTAA
 
Protein sequence
MQVSRNIKEI NAKQREKSIK RSLKKTDILR LILNIVVVFF VLFPIIYAFV MSVKPSHELY 
DKTFFTAHPT LNNYKDVFKI APIEGYIINS LIVSVIITFF QMVTAILSAF ALHFLNFKKK
GILFAIIMAT TMIPGETTII SNFLMISGWG FTDSFFGLVA PYLTSAMGIF LFRQAFKSFP
MEIYEASKID GASDLGFIFR ILIPLSKPTI GALAVQSFLG AWNMYMWPLL ITGSDRYRTV
QIGISMLNSA DSQSMLLMIA GVVVCMIPSL IIFMFAQKNM VKGLTTGAVK G