Gene Apre_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0047 
Symbol 
ID8396794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp56541 
End bp58079 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content42% 
IMG OID644994384 
Productalkyl hydroperoxide reductase, F subunit 
Protein accessionYP_003151823 
Protein GI257065567 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR03140] alkyl hydroperoxide reductase, F subunit
[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGATC AAAATTTAAA GAACCAGCTA GCCCAATATC TTGACTTATT AAAAACAGAA 
GTCGTTATTG GGCTTTCTGT TGATGATGGT GAAAATTCCA AGAAGCTTAA AGGCTTTATT
GATGACGTAG CAAGCCTATC CGATAAAATT AAAGTTGAGG AAAAAAAGCT TAAATATACT
CCTTCTTTCG AGCTAAAAGG AGACTTCGAC CATGGAGAAA TTGTCTTTGC GGGCCTTCCT
CTAGGCCATG AATTCGCCTC CTTTGCCCTC GCCCTCCTTC AAGTGGGAGG AGTTAGCCCT
AAACTTGATG ATAAAAGTAA GGCTAGGATA GAAGCCCTTG ATGGTAAGAT GGATTTTGAA
ACTATAGTTT CTCTTTCCTG CCACAATTGC CCAGATGTGG TTCAAGCCTT CAATATAATG
GCGATTCTAA ATCCAAATAT TAACCACACC ATGATTGAGG GCGGTATGTT TAAGGACTTG
GCAGAAAGTC GTGACGTCCT CGCCGTTCCT GCTATCTTTA AGGATGGAGA CTTCTTTGAA
GGCGGCAAGC AATCTATGGA CAAGATCTTA GATCTTTTAG GAAGTGTTAA AGATACAAGT
CACTTTGAAA ATAAGGATAT CTTCGATGTT CTCATAGTCG GAGGTGGTCC TGCCGCTGCA
ACTTCTGCAA TTTATGCAGC AAGAAAGGGG CTTAGGACAG GGCTTGTGGC GAGTGAATTT
GGTGGTCAAG TCAACGAAAC TCTCGCTATA GAAAATATTC CTGGCTTTAA ATATACAGAA
GGCCCTGACT TCATGAATCA GATGAAGGAT CAAGTCCAAG CCCTTGGTGT AGATATCATG
ACAGGAGCTT TGGCAAAAGC TATAAAGAGG AATGATAAAG ATAAATTAAT TGAAATGAGC
CTAGATAATG ATATTTCCCT ACAAGCAAAA ACAGCTATCC TTGCGACAGG AGCTAGGTGG
AGACTTATAG GAATTCCTGG GGAAACTGAG TTTAGAAACA AGGGAGTTGC CTATTGCACC
CACTGTGATG GTCCCCTCTT TAAGGATAAG CCAGTAGCAG TAATTGGAGG CGGCAATTCC
GGAGTGGAAG CTGCAATTGA TCTTGCTAAT CTTGCCAAAA AGGTTACAGT AATCGAATTT
CTCCCAGAGC TTAAGGCTGA CAAAATCCTC CAAGATAAGC TAAAAAGCCT AGGAAATGTA
GAGATAATAA CCAACGCCCA AACGACCGGC CTTTATGGAG ATGGCAAGGT CCAGAGCCTA
AAATTTACCG ACAGGTCCTC TGGAGAAGAG AAGGAAATAG CAATCGACGG CTGCTTCATC
CAAGTAGGCC TTGTTCCTAA TACAGAATGG CTTACTGAAA GTGAAGTCCA GCTAAATAAA
CATGGCGAAA TAATAACTGA CAAGAATGGC GCAAGCAATG TCGAAGGAAT TTTTGCAGCA
GGAGATGCTA CAGAAACTGC CTTCAAACAA ATTGTAATAG CTGCAGGCTC TGGTGCAACA
GCAGCCCTCG GAGCCTTCAA CTACTTGATG GTAAACTAA
 
Protein sequence
MLDQNLKNQL AQYLDLLKTE VVIGLSVDDG ENSKKLKGFI DDVASLSDKI KVEEKKLKYT 
PSFELKGDFD HGEIVFAGLP LGHEFASFAL ALLQVGGVSP KLDDKSKARI EALDGKMDFE
TIVSLSCHNC PDVVQAFNIM AILNPNINHT MIEGGMFKDL AESRDVLAVP AIFKDGDFFE
GGKQSMDKIL DLLGSVKDTS HFENKDIFDV LIVGGGPAAA TSAIYAARKG LRTGLVASEF
GGQVNETLAI ENIPGFKYTE GPDFMNQMKD QVQALGVDIM TGALAKAIKR NDKDKLIEMS
LDNDISLQAK TAILATGARW RLIGIPGETE FRNKGVAYCT HCDGPLFKDK PVAVIGGGNS
GVEAAIDLAN LAKKVTVIEF LPELKADKIL QDKLKSLGNV EIITNAQTTG LYGDGKVQSL
KFTDRSSGEE KEIAIDGCFI QVGLVPNTEW LTESEVQLNK HGEIITDKNG ASNVEGIFAA
GDATETAFKQ IVIAAGSGAT AALGAFNYLM VN